Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2253 ATGGCTGGGAGAGATCTTGAGAGTGGCGGAACTAAGAACAATAGAGCTGAGAACAACAACTACTCTGCTCCACCTGCTGTTTCTTCCTATTCCTATGACCCAGAGACTCATTGGACATCATGGCTCGTGCCTATGTTTGTGGTTGCCAATATTGCTGTCTTTATTGTGGCCATGTACATCAACAATTGTCCAAAGAACAATTTTGGATTGCAAGGTGATTGTGTGGCTAGGTTCCTTGGAAGGTTCTCCTTCCAGCCTCTTCGGGAGAATCCCTTGCTTGGCCCTTCTTCCTCAACGTTGACCAAGATGGGAGCTCTTAAGTGGGACAGTGTTGTCAATAAGCATCAGGGATGGAGACTTGTCTCTTGCATTTGGTTACATGCTGGAATTATTCATCTGCTTGCAAACATGTTGAGTCTCGTCTTCATCGGCATTCGCCTCGAGCAGCAATTTGGATTTGTGAGGATAGGACTCATATACCTGTTGTCTGGATTTGGTGGGAGTGTACTATCTACTCTATTTATTAGAAACAACATCTCAGTTGGTGCTTCTGGTGCTCTTTTTGGACTTCTTGGAGCAATGCTATCAGAACTTCTCACAAACTGGACTATATATTCAAACAAAGCAATGGCTTTGTTCACACTTCTTGTTATCATTGTCATCAACCTTGCCATTGGAATTTTGCCCCACGTCGATAATTTTGCTCACATTGGGGGATTCCTTACGGGATTTCTCCTCGGTTTCATTTTGCTACCCCGTCCTCAGTTTGGTTGGTTAGAGCAGCGCCACCTTCCTGCCGGAGTTCGCCTAAAGTCAAAGTACAAGGCTTACCAATATGTTCTTTGGATTGTCTCTCTTGTTCTGTTGATTGCTGGGTTATCAATTGCATTGGTGATGCTATTCCGGGGTGAAAATGTTATAGAATGTCCCATAGTGAATCAACTATTCTCAGCATGCTCCATATTCATCACATATGGGTCCCCTGACCCAATTCCAGGGACCCCATGTTGTGATGCCATGTCAGGGCTGAACATCATTGCTAACTCTGGTGACAATAGGCAATCTGTGTGTAGGTGCTTGATGGGCCTCATTGAAACTTACAACCCAAATGCCACTGCTATAGGTATCCTGCCAGGTCTTTGTGGCATCTCTTTGGGCTTCACTATTGATCCCAATACAGATTGTGGGTTATCTTTCAACCCATATCAGGCACTCATGGACTTTCCTTAA 1230 0.4455 MAGRDLESGGTKNNRAENNNYSAPPAVSSYSYDPETHWTSWLVPMFVVANIAVFIVAMYINNCPKNNFGLQGDCVARFLGRFSFQPLRENPLLGPSSSTLTKMGALKWDSVVNKHQGWRLVSCIWLHAGIIHLLANMLSLVFIGIRLEQQFGFVRIGLIYLLSGFGGSVLSTLFIRNNISVGASGALFGLLGAMLSELLTNWTIYSNKAMALFTLLVIIVINLAIGILPHVDNFAHIGGFLTGFLLGFILLPRPQFGWLEQRHLPAGVRLKSKYKAYQYVLWIVSLVLLIAGLSIALVMLFRGENVIECPIVNQLFSACSIFITYGSPDPIPGTPCCDAMSGLNIIANSGDNRQSVCRCLMGLIETYNPNATAIGILPGLCGISLGFTIDPNTDCGLSFNPYQALMDFP* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2253 409 PANTHER RHOMBOID-RELATED 1 307 IPR002610 GO:0004252|GO:0006508|GO:0016021
Aev09g2253 409 MobiDBLite consensus disorder prediction 1 20 - -
Aev09g2253 409 Gene3D - 35 253 IPR035952 -
Aev09g2253 409 PANTHER RHOMBOID-LIKE PROTEIN 3 1 307 - -
Aev09g2253 409 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 307 396 IPR036312 -
Aev09g2253 409 Gene3D - 307 397 IPR036312 -
Aev09g2253 409 PRINTS Plant phospholipid transfer protein signature 368 385 IPR000528 GO:0006869|GO:0008289
Aev09g2253 409 PRINTS Plant phospholipid transfer protein signature 331 345 IPR000528 GO:0006869|GO:0008289
Aev09g2253 409 PRINTS Plant phospholipid transfer protein signature 386 397 IPR000528 GO:0006869|GO:0008289
Aev09g2253 409 PRINTS Plant phospholipid transfer protein signature 308 324 IPR000528 GO:0006869|GO:0008289
Aev09g2253 409 PRINTS Plant phospholipid transfer protein signature 352 367 IPR000528 GO:0006869|GO:0008289
Aev09g2253 409 SUPERFAMILY Rhomboid-like 38 255 IPR035952 -
Aev09g2253 409 CDD nsLTP1 307 395 - -
Aev09g2253 409 Pfam Rhomboid family 112 254 IPR022764 GO:0004252|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2253 Aev-Chr9 25119517 25123533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2253 303 395 Acyl Lipid Metabolism Gene Families AT3G08770 33.333 4.62e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2253 - - gmx:100784224 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2253 09 25119517 25123533 Aev09g2253 09 25119517 25123533 ECH