Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2240 ATGATAACAGGAAAGAAGAAAACTCAGCTCAGAAATCGGAATCAGCAGTTCTCTTGTCAGATATTGGGCCACATCTTGGGCCGTTCCTCCTACCAACAAAGCCCACTCCAATTCCTTCAAAATAAAAAAACTAAGCAAAACTATTACTACTCATTTGCAACAGCAGTGACCGCAGCACTTCTTCCCACCCCAACATTCTCTCGAAGCGCGCCAAATCCAACCAACACTCCTTTCCCTCTACGTAACTCACCGCCGGTACTCCGGTGCGGCGGCGGCGCCACCACCACCGCTGGTATGGGAAAGCAAAAACAGCAAGTAATTTCCCGCTTCTTCGCCCCCAAACCCAAACCCGCATCATCCACCACCACCGACTCACCACCTTCTTCTCCTCCTCCTCCTTCACCACCTCCGTCTTCTTCCTCTTCTCGCCCCAACCCTCCAACCCCGAAAATCTCCGCCACAGTCACATTCTCTCCATCCAAACGCCTCCTAACTTCTCAACTCACTTCCCCAAACAAGCCCCACAAACTCCCCAAACTCTCTCCTCACACCCACAACCCTCTCCCCAATCCCTCCATCCATCAGCGCTTCCTCCAGAAGCTTCTAGAACCTTCTGATCCCGACCTACCACCTCATTCCTCTTCCAAACCCCTAAAGTACACTCCTTTGGAGCAGCAAGTGGTGGAGCTCAAAGCTAAGTACCCTGATGTTCTTTTGATGGTTGAAGTTGGTTACAGGTACCGTTTTTTTGGCCAAGATGCTGAGAATGCTGCTAGGGTTTTGAGTATTTATGCGCATATGGATCACAATTTTTTGACTGCTAGTATACCAACTTTTCGATTGAATGTCCATGTGAGGAGGCTTGTGAGCGCTGGGTACAAGGTTGGTGTGGTTAGGCAAACCGAGACTGCAGCCATTAAGGCCCATGGTTCGAACCGGTTAGGCCCATTTTGCAGGGGTTTGTCGGCGTTGTACACGAAGGCCACACTGGAGGCGGCACCGGATTTAGGGGGAGGGGAAGAAGGGTGTGGGGCTGAGAGCAATTACTTGATGTGTGTGGTGGAGAAGAGCATTTTGGGAGAGAGGTCTAGTTGTGGGGTGGAGGGTGGTTTTGATGTGAAGATTGGATTTGTTGCTGTGGAGATATCAACTGGGGATGTTGTTTTTGGGGAGTTTAATGACAGTTTTTTGAGGAGTCAGCTTGAGGCTGTGATTTTGAGTTTGTCTCCTGCTGAGTTGCTTCTTGGGGACCCTCTTTCCAAGCAAACGGAGAAGTTATTACTGGCTTTTGCTGGACCTGCCTCAAATGTTCGTGTAGAACGAACCTCGCGAGATTGCTTTGCTGATGGAGGTGCTCTGGCTGATGTATTGACCATGTATGAGAACATGGGTGGAAGCAGTTCATCAGATCCAATGCAGAGCAATGACTTGACTGAGCAGAGAAATCAGCAGTTGGTGGTTAAGGAGGTGATGAACATGCCAGATTTGGCTGTCCAATCTTTGGCCTTAACAATTCACCATTTAAAGGAATTTGGTTTTGAAAAAATCATGTGTTCAGGATCTTCATTAAGGCCCTTCTCAACCAATATGGAAATGACCCTCTCAGCCAATGCACTTCAACAACTGGAGGTTTTAAAAAATAATAGTGATGGATCGGAGAACGGTTCCTTGCTGCATGTCATGAATCGCACCCTTACCATATTTGGCTCCAGGCTTCTTAGGCATTGGGTATCTCACCCGTTGTGTGATCAAACCATGATTTCTGCTCGTCTTCATGCCGTATCTGAAATTGCAGAGTCCATGGGATCTTGTAATGGTATGAAGAATCTAGAGTATGATGATGAAGACCCTGATGTAACAGTTGTGCAACCTGAGTTAGCTTACATACTTTCATTGGTTTTGACAAATCTGGGTCGGGCACCTGATATACAGCGTGGGATTACAAGAATTTTCCATCGCACTGCTAGCCCATCTGAGTTTGTTGCTGTAATGCAAGCTATTTTATCTGCTGGAAAACAGCTTCAGCAACTTACCACAGGGGAGGAGGAAAACAATGGGTTGCACTCTAATCTGTTGAAAAAGTTAATATTCAATGCTTCCTCTGCCAGTGTTATTGGCAATGCTGCAAAAATGTTGTCATCTTTAAACAAAGAAGCTGCTGATCAAGGTGATCTAACAAATTTGATCATTGCATCTGAGGGACAATTTCCAGAGGTCATTAGAGCTCGAAAGGATTTTAGGATGGAAGTGGAACAATTAGATTTGTTGATTGGCTTGTACCGCAAACGGCTTGGAATGCGAAGTTTGGAATTCACGAGTGTTTCTGGAACAACTCATTTGATTGAGTTATCAACTGATGTGAAGGTTCCATCAAACTGGGTTAAGGTAAATAGCACTAAGAAAACAATCCGGTATCACCCTCCTGAAGTCGTGACAGCATTGGACAAGGTATCATTAGCAAAAGAGGAGCTTACTGTCGCCTGCCGAGCTGCTTGGGATAGCTTTCTAAGGGACTTCAGTAAACACTATGCTGATTTCCAAGCTGCTGTTCAAGCACTGGCTGCTTTAGATTGTTTGCATTCACTTGCCATTCTTTCAAGAAACAAGGGATATGTTCGTCCAATGTTCGTAGATGATTGTGAGCCTGTTCAGATACAAATTTGTTCTGGTCGACATCCGGTTTTGGAGACTACCTTACAAGACAACTTTGTCCCAAATGATACAAAGATGCATGCAGACAGAGAGTACTGCCAGATTGTTACCGGACCCAATATGGGGGGCAAAAGTTGTTATGTTCGCCAGGTGGCTCTGATCGCTATAATGGCTCAGGTTGGTTCCTTTGTACCAGCATCCTCAGCAAAACTACACGTCCTGGATGGAATCTACACCCGGATGGGTGCTTCTGACAGTATACAGCAAGGGAGAAGCACCTTCCTAGAGGAACTAAGTGAGACTTCACAAATACTTCATAACTGCACAGGAAATTCACTGGTTATCATTGATGAACTTGGGAGAGGTACAAGTACACATGACGGTATGGCCATTGCTTATGCGACATTGCATTATCTTCTGAAGCAAAAAAGGAGCATGGTCCTCTTTGTCACACACTACCCGAAGATCGCCAGCCTTACAGCCGAATTTCCAGGCTCTGTGGGAGCATATCACGTGTCACATCTGACCTCACATGATGGTACGAGTAAAAACAAAAAGTTGGATCATGATGATATCACTTATCTATACAAGCTTGTACCCGGTGTGTCAGAGAGGAGTTTCGGATTTAAGGTGGCTCAGCTTGCTCAGTTACCTCCATATTGCATAAGCCGAGCCATTGTGATGGCTTCCAAATTGGAAGCACTAGTGAACAGTCGAATTCATAGTAGATCGGGAAAGCGGCCATCGTCGGATGCACTGGTGATTGATCAAGAACAAGAATTGCATCAGCTCATGTCTCAACCACACGATTTTCCACATCAAGAGTTCGGTAGTGCTTACAAGGAATTCTATTCAAACTTAAAAGCTGCAGCACTAGATGATGGCCATGCAGAGAACTTTCAGCTATTGGAGCATGCTAGAATCATTGCATACAAATTAATTGATAAATGCAGTTTGTATGAATGA 3618 0.4561 MITGKKKTQLRNRNQQFSCQILGHILGRSSYQQSPLQFLQNKKTKQNYYYSFATAVTAALLPTPTFSRSAPNPTNTPFPLRNSPPVLRCGGGATTTAGMGKQKQQVISRFFAPKPKPASSTTTDSPPSSPPPPSPPPSSSSSRPNPPTPKISATVTFSPSKRLLTSQLTSPNKPHKLPKLSPHTHNPLPNPSIHQRFLQKLLEPSDPDLPPHSSSKPLKYTPLEQQVVELKAKYPDVLLMVEVGYRYRFFGQDAENAARVLSIYAHMDHNFLTASIPTFRLNVHVRRLVSAGYKVGVVRQTETAAIKAHGSNRLGPFCRGLSALYTKATLEAAPDLGGGEEGCGAESNYLMCVVEKSILGERSSCGVEGGFDVKIGFVAVEISTGDVVFGEFNDSFLRSQLEAVILSLSPAELLLGDPLSKQTEKLLLAFAGPASNVRVERTSRDCFADGGALADVLTMYENMGGSSSSDPMQSNDLTEQRNQQLVVKEVMNMPDLAVQSLALTIHHLKEFGFEKIMCSGSSLRPFSTNMEMTLSANALQQLEVLKNNSDGSENGSLLHVMNRTLTIFGSRLLRHWVSHPLCDQTMISARLHAVSEIAESMGSCNGMKNLEYDDEDPDVTVVQPELAYILSLVLTNLGRAPDIQRGITRIFHRTASPSEFVAVMQAILSAGKQLQQLTTGEEENNGLHSNLLKKLIFNASSASVIGNAAKMLSSLNKEAADQGDLTNLIIASEGQFPEVIRARKDFRMEVEQLDLLIGLYRKRLGMRSLEFTSVSGTTHLIELSTDVKVPSNWVKVNSTKKTIRYHPPEVVTALDKVSLAKEELTVACRAAWDSFLRDFSKHYADFQAAVQALAALDCLHSLAILSRNKGYVRPMFVDDCEPVQIQICSGRHPVLETTLQDNFVPNDTKMHADREYCQIVTGPNMGGKSCYVRQVALIAIMAQVGSFVPASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSQILHNCTGNSLVIIDELGRGTSTHDGMAIAYATLHYLLKQKRSMVLFVTHYPKIASLTAEFPGSVGAYHVSHLTSHDGTSKNKKLDHDDITYLYKLVPGVSERSFGFKVAQLAQLPPYCISRAIVMASKLEALVNSRIHSRSGKRPSSDALVIDQEQELHQLMSQPHDFPHQEFGSAYKEFYSNLKAAALDDGHAENFQLLEHARIIAYKLIDKCSLYE* 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2240 1205 ProSitePatterns DNA mismatch repair proteins mutS family signature. 996 1012 IPR000432 GO:0005524|GO:0006298|GO:0030983
Aev09g2240 1205 Gene3D - 871 1151 IPR027417 -
Aev09g2240 1205 Gene3D MutS, connector domain 344 531 IPR036678 GO:0005524|GO:0006298|GO:0030983
Aev09g2240 1205 MobiDBLite consensus disorder prediction 145 174 - -
Aev09g2240 1205 PANTHER DNA MISMATCH REPAIR PROTEIN MSH3 184 1162 - -
Aev09g2240 1205 Pfam MutS domain II 348 437 IPR007860 GO:0005524|GO:0006298|GO:0030983
Aev09g2240 1205 SUPERFAMILY DNA repair protein MutS, domain I 214 329 IPR016151 GO:0005524|GO:0006298|GO:0030983
Aev09g2240 1205 SMART DNAend 552 898 IPR007696 GO:0005524|GO:0006298|GO:0030983
Aev09g2240 1205 SMART mutATP5 915 1114 IPR000432 GO:0005524|GO:0006298|GO:0030983
Aev09g2240 1205 Gene3D DNA repair protein MutS, domain I 212 335 IPR016151 GO:0005524|GO:0006298|GO:0030983
Aev09g2240 1205 PIRSF Msh6 61 203 IPR017261 GO:0006298|GO:0030983
Aev09g2240 1205 PIRSF Msh6 209 1175 IPR017261 GO:0006298|GO:0030983
Aev09g2240 1205 MobiDBLite consensus disorder prediction 64 192 - -
Aev09g2240 1205 Pfam MutS domain V 918 1117 IPR000432 GO:0005524|GO:0006298|GO:0030983
Aev09g2240 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 871 1117 IPR027417 -
Aev09g2240 1205 SUPERFAMILY DNA repair protein MutS, domain II 346 427 IPR036678 GO:0005524|GO:0006298|GO:0030983
Aev09g2240 1205 Pfam MutS domain I 221 331 IPR007695 GO:0005524|GO:0006298|GO:0030983
Aev09g2240 1205 Gene3D - 713 839 - -
Aev09g2240 1205 Pfam MutS domain III 537 863 IPR007696 GO:0005524|GO:0006298|GO:0030983
Aev09g2240 1205 MobiDBLite consensus disorder prediction 124 144 - -
Aev09g2240 1205 Gene3D - 534 863 - -
Aev09g2240 1205 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 184 1162 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Aev09g2240 1205 SUPERFAMILY DNA repair protein MutS, domain III 536 868 IPR036187 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2240 Aev-Chr9 25031965 25038505 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2240 K08736 - gmx:100789883 1643.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2240 09 25031965 25038505 Aev09g2240 09 25031965 25038505 ECH