Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2239 ATGGTGGTGTCATCTCATAACCAGGTGGTGAACACGTACCCACTTTCAAGCTACACCTTCGGCACCAAGGAGCCCAAGATGGAGAAAGACACCTCCGTCGCGGATCGTCTTGCTCGCATGAAACTCAACTATATGAAAGAAGGTATGAGGACCAGCGTCGAGGGTATTTTACTGGTACAAGAACATAATCATCCCCATATCCTTCTTCTGCAAATTGGAAACACATTTTGCAAGCTCCCAGGTGGTCGTCTCAAGCCAGGAGAAAATGAAATTGAGGGCTTGAAGAGAAAGTTGACCAGCAAGCTTGGTGCTAATTCACCCGCTCTTGTGCCCGACTGGCAGATTGGTGAGTGTGTGGCAAACTGGTGGAGGCCAAATTTCGAAACCATAATGTATCCATACTGCCCTCCTCATATAACGAAACCCAAGGAGTGCAAAAAGCTTTTCCTTGTTCACTTGTCTGAGAGAGAATACTTTGCAGTTCCCAAGAACCTAAAACTGCTAGCTGTTCCATTGTTTGAACTCTACGATAATGTTCAGAGATATGGACCAGTTATATCCACCATTCCTCAGCAGCTTTCCAGATTCCATTTCAAAATGATCACTAATTGA 612 0.451 MVVSSHNQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEGILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVANWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFHFKMITN* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2239 203 PANTHER PRE-MRNA CLEAVAGE FACTOR IM 25 KDA SUBUNIT 2-LIKE 8 185 - -
Aev09g2239 203 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 8 185 IPR016706 GO:0003729|GO:0005849|GO:0006378
Aev09g2239 203 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 8 200 - -
Aev09g2239 203 ProSiteProfiles Nudix hydrolase domain profile. 49 174 IPR000086 -
Aev09g2239 203 SUPERFAMILY Nudix 56 155 IPR015797 -
Aev09g2239 203 Pfam Nucleotide hydrolase 9 196 IPR016706 GO:0003729|GO:0005849|GO:0006378
Aev09g2239 203 PIRSF CPSF-25 1 203 IPR016706 GO:0003729|GO:0005849|GO:0006378
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2239 Aev-Chr9 25029808 25031880 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2239 K14397 - gmx:100790200 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2239 09 25029808 25031880 Aev09g2239 09 25029808 25031880 ECH