Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2227 ATGAACAATAACCACACCGAGTTACCCCGCCGGAAAAGGTTCAGAGATGAGAACCCCGCAGCGTTATCCTCTCCAGAACAGAACAGCAACAAGAAAAAGCGGGGGCAGGGTGCCCTAATTCCACAAGACCCACTAACCTCCACACACCCCAATGATCCAGTAGCACTAGCGAAGGAACAAGATGCTGAACCCAATGGGGTCATTGCAGAGCACTCTGTTTCTCATTCAACACCACGGAAAAGGAGGAGGGGGAGGAAAAAGGATGTGGCTTTGGCCTCTTCCGAAGGGGAACAGCCCAATTCCTTGCAAGTGGAATCGGGGCAGAGGAATGGTAAGGAGGAAGGTGCAGAACCTTGTGAAGTGAAAGTTAGAGCAGTGCAGCCTCAGGTATGTCACAAGCATGATCTTGCAAACTCTCTTGTTCAGGAAAAGGAAAATTTTGTAGAATTGAAAGAAACTAGTTCAGAACAACCTCAATTGTTGAATAATCAGGAACATGAATTGGTAAACAAAGTAGTAAAACCTAGAAAGGAAAATAGGGTAGGTAGAAATGAAGGTGCTGCAGAGCACCCTGAATTAGTCCCTGTACCTGGTTCGACTCCTTTGAAAGACACACCCAGGAAGAAGAAATCGCAGAAGAAAAAGATGAATATGCTGAGTGGTGAAGGGGAAGAACCAAATGAATCCAATGATGCAGAGCACCCTCAGGTCTGCCCTAAGCCTGAATCCGCATCCCCAATACACACTCAACATGTAATCCCAATGGAACCAGAAGTCCCTACTAACCCAGAACAGAAGTTGTCAAAGAAAAAGAGGAGGAAGAGGAAGAAAAAGAACAGCGCGCTAAACAATGAAGTGGCAGAACCTGACAAAAACTCTATACTCCCCATTGCAGCATCCCAAACAGACCAAAAACCCTCAACAGACTCAGCAACCCCAGTAGACCAAGAACAGAAAAAGTCTAAGAAAAAGAGTGCACTCAAAAGCGAAGGGTTGGAATCTAATGAGAACAATACTGAGTCAACTGCTGAAATCCCTGTGAGCGAAGACAATGTTAAGCAACCAGCCAATTCCCCGTTTTGGAGAAGTAAACAACTCAAAGGCAACAAAGTTCCTTGGGATGAGAAGTGTATGGCGTGCCACAAGCCTGATCACAAATTGAAAGATTGCCCCAATATTGACGCAATTTGCTTCTTCTGTGGAAAAATTGGCCACACACTTGCAAATTGCTCAGTGTCTAAAGCAGGACGGTTCACTTGGTGCTTATTCTGTTCTTCTCGTGGACACTTCACTAGTAAGTGCCCTCGAAATGGTCATGGAATTAATCCAAAGGTCGTTGCTGCTAATGGGCCTGTTCACAAAACATCTGGAATGGGCGTTAGTGATGAATGTAAATTGAAGTTTCTTGAGCTAAAGGCAAAGAGGAACTACCGTTTCATTGTGTTTAAGATTGAGAACCAACGAGTGATGTTGGAGAAACTTGGAAGCCCAGAAGAAACCTATGAGAACTTCACTGAATCTCTGCCTCCTAATCAGTGCCGCTATGCTGTTTTCGATTTTGACTTTACTACTAACGAGAACTGTCAGAAAAGCAAAATCTTCTTCATTGCATGGTCACCGGATACATCAAAGGTTAGAGAAAAAATGGTGTATGCAAGCACCAAGGATAGATTCAAGAGGGAACTTGATGGCATTCAAGTTGAGTTGCAAGCAACGGATCCTAGTGAGATGAGTTTTGACATCATAAAAGCTCGAGCAATATAA 1764 0.4422 MNNNHTELPRRKRFRDENPAALSSPEQNSNKKKRGQGALIPQDPLTSTHPNDPVALAKEQDAEPNGVIAEHSVSHSTPRKRRRGRKKDVALASSEGEQPNSLQVESGQRNGKEEGAEPCEVKVRAVQPQVCHKHDLANSLVQEKENFVELKETSSEQPQLLNNQEHELVNKVVKPRKENRVGRNEGAAEHPELVPVPGSTPLKDTPRKKKSQKKKMNMLSGEGEEPNESNDAEHPQVCPKPESASPIHTQHVIPMEPEVPTNPEQKLSKKKRRKRKKKNSALNNEVAEPDKNSILPIAASQTDQKPSTDSATPVDQEQKKSKKKSALKSEGLESNENNTESTAEIPVSEDNVKQPANSPFWRSKQLKGNKVPWDEKCMACHKPDHKLKDCPNIDAICFFCGKIGHTLANCSVSKAGRFTWCLFCSSRGHFTSKCPRNGHGINPKVVAANGPVHKTSGMGVSDECKLKFLELKAKRNYRFIVFKIENQRVMLEKLGSPEETYENFTESLPPNQCRYAVFDFDFTTNENCQKSKIFFIAWSPDTSKVREKMVYASTKDRFKRELDGIQVELQATDPSEMSFDIIKARAI* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2227 587 Pfam Cofilin/tropomyosin-type actin-binding protein 464 584 IPR002108 GO:0003779
Aev09g2227 587 PANTHER COFILIN-RELATED 243 587 IPR017904 GO:0015629|GO:0030042
Aev09g2227 587 MobiDBLite consensus disorder prediction 315 330 - -
Aev09g2227 587 MobiDBLite consensus disorder prediction 295 314 - -
Aev09g2227 587 Gene3D - 305 417 - -
Aev09g2227 587 MobiDBLite consensus disorder prediction 152 166 - -
Aev09g2227 587 MobiDBLite consensus disorder prediction 1 119 - -
Aev09g2227 587 MobiDBLite consensus disorder prediction 1 19 - -
Aev09g2227 587 SMART c2hcfinal6 396 412 IPR001878 GO:0003676|GO:0008270
Aev09g2227 587 SMART c2hcfinal6 376 392 IPR001878 GO:0003676|GO:0008270
Aev09g2227 587 SMART c2hcfinal6 420 436 IPR001878 GO:0003676|GO:0008270
Aev09g2227 587 MobiDBLite consensus disorder prediction 215 231 - -
Aev09g2227 587 MobiDBLite consensus disorder prediction 148 362 - -
Aev09g2227 587 SMART adf_2 462 587 IPR002108 GO:0003779
Aev09g2227 587 SUPERFAMILY Retrovirus zinc finger-like domains 396 438 IPR036875 GO:0003676|GO:0008270
Aev09g2227 587 MobiDBLite consensus disorder prediction 169 187 - -
Aev09g2227 587 MobiDBLite consensus disorder prediction 331 362 - -
Aev09g2227 587 PANTHER COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN 243 587 - -
Aev09g2227 587 MobiDBLite consensus disorder prediction 94 108 - -
Aev09g2227 587 SUPERFAMILY Actin depolymerizing proteins 452 585 - -
Aev09g2227 587 CDD ADF_cofilin_like 456 586 IPR017904 GO:0015629|GO:0030042
Aev09g2227 587 MobiDBLite consensus disorder prediction 21 49 - -
Aev09g2227 587 ProSiteProfiles Zinc finger CCHC-type profile. 397 410 IPR001878 GO:0003676|GO:0008270
Aev09g2227 587 ProSiteProfiles ADF-H domain profile. 457 587 IPR002108 GO:0003779
Aev09g2227 587 Gene3D Severin 454 586 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2227 Aev-Chr9 24956986 24961982 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2227 - K05765 pxb:103932201 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2227 09 24956986 24961982 Aev09g2227 09 24956986 24961982 ECH