Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2226 ATGGTGAGCCAGAGGCAGCGACTGGCACGGAAGCGATTCAGAGAAGAGAACCCTGAGCTGTTTCCGACGCCAGAGGCAGCAACTCCCAAGGACCCTGAAAAGAAGAAGAAGAAGGATGAGAAGTACAAGAAGAGCGTGTTAAGGCGCAAAAATAAGGAACTCGGCATCACCAAAAACAAAAGGACTTCCAAGAAGAGCACATCCAGAAAACACCCTCTTAGAATCCCCGGCATGAAGCCCGGTGACACCTGTTTCATCTGCAAAGCCAATGACCATATTGCCAAGTCATGTCCTCAAAAAGCTGAATGGGAAAAAAATAAGATATGCTTGAGGTGTCGACGGCGTGGACATAGAGCCAAGAATTGCCCTGAGCTGCAAGGTGGATCCAAGGATGAGAAGTATTGCTATAATTGTGGGGAAACTGGGCATGCACTTGCAAACTGTCTCCAGCCTCTTCAAGAAGGAGGGACTAAGTTTGCTGAGTGCTTTGTCTGTAATCAACGTGGACACTTGAGTAAAAACTGCCCTCAAAATACTCATGGCATTTATCCCAAGGGTGGATGTTGTAAAATATGTGGTGGTGTGACACATTTGGCAAAGGATTGTCCTGACAAAGGGAAGGCAGGATCTCTCGGTGCTAATCGGCCTGCTTATGGATCATTTGGAACTGAAGTGAGGCCAAGTGGCAAGGTTACGAAATTTGTGAGTGGAGATGATATTGAGGATGATTTCATGGCAGATGACTTACAAGGTGGCGACAAGAGCAAGTCCTCACAATCAAAAGATTGTCATGTAAAACCAAAGAAGAAGGGTCCTAAAGTTGTGAACTTCAACTAA 837 0.46 MVSQRQRLARKRFREENPELFPTPEAATPKDPEKKKKKDEKYKKSVLRRKNKELGITKNKRTSKKSTSRKHPLRIPGMKPGDTCFICKANDHIAKSCPQKAEWEKNKICLRCRRRGHRAKNCPELQGGSKDEKYCYNCGETGHALANCLQPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGGCCKICGGVTHLAKDCPDKGKAGSLGANRPAYGSFGTEVRPSGKVTKFVSGDDIEDDFMADDLQGGDKSKSSQSKDCHVKPKKKGPKVVNFN* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2226 278 ProSiteProfiles Zinc finger CCHC-type profile. 135 148 IPR001878 GO:0003676|GO:0008270
Aev09g2226 278 Pfam Zinc knuckle 83 99 IPR001878 GO:0003676|GO:0008270
Aev09g2226 278 Pfam Zinc knuckle 162 177 IPR001878 GO:0003676|GO:0008270
Aev09g2226 278 Pfam Zinc knuckle 134 148 IPR001878 GO:0003676|GO:0008270
Aev09g2226 278 Gene3D - 106 156 - -
Aev09g2226 278 Gene3D - 55 105 - -
Aev09g2226 278 SUPERFAMILY Retrovirus zinc finger-like domains 128 179 IPR036875 GO:0003676|GO:0008270
Aev09g2226 278 SUPERFAMILY Retrovirus zinc finger-like domains 77 125 IPR036875 GO:0003676|GO:0008270
Aev09g2226 278 MobiDBLite consensus disorder prediction 1 77 - -
Aev09g2226 278 MobiDBLite consensus disorder prediction 28 60 - -
Aev09g2226 278 SMART c2hcfinal6 83 99 IPR001878 GO:0003676|GO:0008270
Aev09g2226 278 SMART c2hcfinal6 108 124 IPR001878 GO:0003676|GO:0008270
Aev09g2226 278 SMART c2hcfinal6 134 150 IPR001878 GO:0003676|GO:0008270
Aev09g2226 278 SMART c2hcfinal6 161 177 IPR001878 GO:0003676|GO:0008270
Aev09g2226 278 SMART c2hcfinal6 188 204 IPR001878 GO:0003676|GO:0008270
Aev09g2226 278 ProSiteProfiles Zinc finger CCHC-type profile. 162 177 IPR001878 GO:0003676|GO:0008270
Aev09g2226 278 PANTHER OS04G0555800 PROTEIN 1 278 - -
Aev09g2226 278 MobiDBLite consensus disorder prediction 247 265 - -
Aev09g2226 278 Gene3D - 157 214 - -
Aev09g2226 278 ProSiteProfiles Zinc finger CCHC-type profile. 109 124 IPR001878 GO:0003676|GO:0008270
Aev09g2226 278 MobiDBLite consensus disorder prediction 243 278 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2226 - K05765 ahf:112779196 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2226 09 24953666 24955912 Aev09g2226 09 24953666 24955912 ECH