Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2210 ATGTGGCCATTCAGCAACAAAGGGCCTTCAGGTTTTTCATCATCATCCACTGCTGAGGAAGTCACTCATGCCATCGATGCCTCTGGTCTCACTGCTATTGTCACAGGAGCATCCAGTGGTATTGGCACTGAGACAACGCGTGTTCTTGCTTTGCGTGGTGTCCATGTGGTCATGGGGGTGAGAAACTTGGTTGCTGCTAAAGATGTTAAAGAAGCCATTGTTAAGGAGATTCCCTCAGCCAAAATTGATGCCATGGAATTAGATCTCAGTTCAATGGAGTCTGTCAAGAAATTTGCATCACAGTTTAAATCATCTGGTCTTCCTTTGAACATCCTGATAAACAATGCAGGAATTATGGCTTGCCCTTACATGCTGTCCAAAGACAACATTGAGCTACAGTTTGCCACAAATCACTTAGGTCATTTTCTTTTGACAAATCTTTTGTTGGATACCATGAAGAAAACATCACGTCAAAGTAAGAAAGAAGGAAGAATTGTGAATGTCTCCTCAGAGGCTCACCGATTTACTTATCCTGAAGGAATTCGTTTTGACAAAATTAATGATAAAGCAAGTTATAGCAACTGGCGTGCATATGGGCAGTCAAAGCTAGCTAACATTTTACATGCTAATGAACTCACAAGACGTCTTAAGGAAGATAAAGTGGATATTACTGCTAATTCTCTTCATCCAGGAGCCATCTCCACCAATCTTTTCCGTCATAGCGGTTTAATTAACGGTCTAGTCAACGTGTTTGGGAGACTTGTGCTTAAAAATGTACAGCAGGGAGCAGCAACAACTTGCTATGTGGCATTGCACCCACAAGTGAAGGGAGTTAGTGGCAAATATTTTTCAGATAGCAATGAGGCCAAACCAACCTCACATGGTACTGATGCTGATTTGGCTAAGAAACTTTGGGACTTCAGTATGAATTTGATTAAGTAG 942 0.4161 MWPFSNKGPSGFSSSSTAEEVTHAIDASGLTAIVTGASSGIGTETTRVLALRGVHVVMGVRNLVAAKDVKEAIVKEIPSAKIDAMELDLSSMESVKKFASQFKSSGLPLNILINNAGIMACPYMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTSRQSKKEGRIVNVSSEAHRFTYPEGIRFDKINDKASYSNWRAYGQSKLANILHANELTRRLKEDKVDITANSLHPGAISTNLFRHSGLINGLVNVFGRLVLKNVQQGAATTCYVALHPQVKGVSGKYFSDSNEAKPTSHGTDADLAKKLWDFSMNLIK* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2210 313 Gene3D - 18 313 - -
Aev09g2210 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 288 IPR036291 -
Aev09g2210 313 PANTHER SHORT-CHAIN DEHYDROGENASE TIC 32 2 313 - -
Aev09g2210 313 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Aev09g2210 313 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Aev09g2210 313 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Aev09g2210 313 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Aev09g2210 313 Pfam short chain dehydrogenase 31 179 IPR002347 -
Aev09g2210 313 PANTHER RETINOL DEHYDROGENASE 2 313 - -
Aev09g2210 313 CDD retinol-DH_like_SDR_c_like 29 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2210 Aev-Chr9 24835845 24839551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2210 33 291 Acyl Lipid Metabolism Gene Families AT3G55310 28.467 5.11e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2210 - - gmx:100796920 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2210 09 24835845 24839551 Aev09g2210 09 24835845 24839551 ECH