Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2197 ATGTCTCGCACCATGAAGCCTTGTCCAAGACTCAGATATTCCTATGTGATTTGTTTGATCTCAGCAATTGTGATATTGGGATCATCATTAGGAGAATGCAGATTAGCCCCTGAATTAGACAATCTTGAATACCCTGCAATCAATTGCAGAAAGCACAGTGCATGTTTGACAGATTTTGGTGGTGTTGGTGATGGCAAAACCTCCAACACAAAGGCCTTTCAATCTGCAATAACCAACCTCAGCCACTATGCATCTGATGGTGGTGCTGTTCTTGTTGTGCCACCTGGCAAATGGCTAACTGGAAGCTTCAATCTCACAAGTCATTTCACTCTCTTCCTCCATAAGGATGCTGTTATTCTTGCATCACAGGATGAATCAGAATGGCCTCAACTTCCTGTTCTACCATCTTATGGAAGAGGAAGAGATGCTCCTGGTGGAAGGTATAGCAGTCTCATTTTTGGAACTAACCTCACAGATGTTGTAATCACAGGTTACAATGGGACAATTGATGGGCAAGGAGCATATTGGTGGGACAAGTTCCACAAGGATGAACTGAACCTCACTAGACCATATATGATTGAGATCATGTTCTCTGATCAAATCCAGATTTCCAATATTACTTTGATCAACTCTCCTAGCTGGTTTGTCCATCCAATTTATAGCAGTAATATAATAATCCAAGGCCTAACCATTCTTGCACCAGTTGACTCTCCCAACACAGATGGGATAGACCCAGATTCATGTAGAAACACAAGGATTGAAGACTGCTACATTGTCTCTGGTGATGACTGTGTTGCTGTGAAGAGTGGGTGGGATGAGTATGGCATCAAATTTGCAATGCCAACTCAACACCTAATCATTAGGAGGCTTACTTGTATATCCCCTGATAGTGCCATGATTGCATTAGGCAGTGAAATGTCAGGTGGAATCCAAGATGTTAGAGCTGAAGACATCACAGCAATCAATACTCAATCAGCTGTCAGAATCAAGACTGCAGTTGGGAGAGGAGGATATGTGAAAGACATTTTTGTTAAGGGAATGACTTTGAACACTATGAAGTATGTGTTTTGGATGACCGGTGGTTATGGATCACACCCTGACCCTGGATTTGACCCAAATGCACTTCCTGAGATCATAGGGATAAATTATAGAGATGTTAGTGCTAATAATGTTACATATTCAGCAAGACTTGATGGGATTTCTAATGACCCTTTTACTGGGATTTGCATTTCTAATGTGACTATTGCAGTGAGTGAAGAGGATAAGAAGCTTCAGTGGAATTGCACTGATGTTTCTGGAGATACAAGCAGAGTTACTCCTCAGCCTTGTGAGTTGTTACCTGAGAAAGAAGAGAAATTTGACTGTGCTTTTTCAAGTGATAAATTGCCTATTGAAAGTGTTGAGTTGAAGACTTGTTCTTTTTGA 1425 0.4119 MSRTMKPCPRLRYSYVICLISAIVILGSSLGECRLAPELDNLEYPAINCRKHSACLTDFGGVGDGKTSNTKAFQSAITNLSHYASDGGAVLVVPPGKWLTGSFNLTSHFTLFLHKDAVILASQDESEWPQLPVLPSYGRGRDAPGGRYSSLIFGTNLTDVVITGYNGTIDGQGAYWWDKFHKDELNLTRPYMIEIMFSDQIQISNITLINSPSWFVHPIYSSNIIIQGLTILAPVDSPNTDGIDPDSCRNTRIEDCYIVSGDDCVAVKSGWDEYGIKFAMPTQHLIIRRLTCISPDSAMIALGSEMSGGIQDVRAEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLNTMKYVFWMTGGYGSHPDPGFDPNALPEIIGINYRDVSANNVTYSARLDGISNDPFTGICISNVTIAVSEEDKKLQWNCTDVSGDTSRVTPQPCELLPEKEEKFDCAFSSDKLPIESVELKTCSF* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2197 474 PANTHER ENDO-POLYGALACTURONASE-LIKE PROTEIN 25 473 - -
Aev09g2197 474 Gene3D - 41 441 IPR012334 -
Aev09g2197 474 SUPERFAMILY Pectin lyase-like 50 471 IPR011050 -
Aev09g2197 474 Pfam Pectate lyase superfamily protein 57 111 IPR024535 -
Aev09g2197 474 Pfam Glycosyl hydrolases family 28 151 432 IPR000743 GO:0004650|GO:0005975
Aev09g2197 474 PANTHER PECTIN LYASE-RELATED 25 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2197 Aev-Chr9 24755357 24757825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2197 11 472 Glycoside Hydrolase AT3G48950 68.455 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2197 - - gmx:100779166 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2197 09 24755357 24757825 Aev09g2197 09 24755357 24757825 ECH