Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2079 ATGCCGTTTGGCAAGAAAATGTTCCTCCAAATTCTGTGGTGTTTTATTGTTTCCTTATTCATTGAACTTAGCTCCCAAACACCGACTCATCATTACAATTTTGTTGTGAAAGAAGCAAATTACACAAGACTCTGTTCCACAAAAAGCATATTGACAGTGAATGGAAAATTTCCGGGGCCAACTATAAGAGTCCACAAGGGTGACACAATCTATGTTAATGTCTACAACAGGGGAAAATACAACCTCACCATACACTGGCATGGAGTGAAGCAACCAAGGAATCCATGGACAGATGGGCCTGAATACATAACTCAGTGCCCTATCCAACCAGGAGGGAAGTTTAGGCAGAAAGTGGTGTTTTCTACAGAGGAAGGCACATTATGGTGGCATGCTCATAGTGATTGGTCCAGAGCTACTGTCCATGGTGCTATCATTATCTATCCAAGCCACAATACAACCTACCCTTTCTCTAAACCTGATGCAGAGGTTCCCATCATATTTGGAGAATGGTGGAAGAGTGATGTGAACAAAGTCTTCACAGAATTTATTGAATCTGGAGGAGGACCAAACGTATCAGATGCTATCACTATAAATGGTCAACCCGGGGATCTGTTTCCTTGCTCAAGATCAGAAACATTCAAGATAAATGTAGAACAGGGCAAGACTTATCTACTCCGAATAGTTAATGCTGCAATGAATCTAATCCTGTTCTTCTCTGTCTCGAACCACAACCTCACTGTTGTTGGTGCTGATGCAATGTACACAAAGCCATTAACAAGTTCTTACATTTGCATAGCACCAGGACAAACAATGGATGCATTACTTCATGCAAACCAAGAGCCTAATCACTATTACATGGCAGCAAGAGCATATTCAACTCTCACTGGATTTGATAACACCACAGCCACTGCAAGAATCCACTACAGAGGAAATCACACACCACCACCATCATCATCACCTTCACTACCTAATCTTCCAAATTACAATGACACAAAATCAGCTTTTGGATTCATCAGAAGCATTAAGGGAATTCCTAGGAAATACCCTTACATACTCCCAAAAAAATGCAGCACTAACATACTAACCACAGTTTCTGTGAACACAATTCCATGCCCCAAAAACCAATCATGTGAAGGACCAAATGGAGCCAAACTTGCTGCTAGTATGAACAACATAAGCTTTGAATCACCTAGTATTGACATATTGGAAGCATACTATTACCACATAAATGGGGTATACAAAAAGGGGTTTCCTAGTATCCCACCAGAGCTATTCAATTTCACATCAGATTCTCTGTCTCTAGCAATGGCTGGGACAAAGAAGGGGACCAAGGTTAAGGTTCTGGAGTATGGTTCGACAGTGGAAATTGTGTTCCAAGGGACAAACTTGGTTGCAGGGGTGGACCACCCCATGCATCTACATGGATTCAGTTTCCATGTTGTTGGATATGGTTTTGGGAATTTCAACAGAAGTAAGGATCCAAAGGATTACAATCTCATTGATCCTCCTCTAAGGAATACTGTCATTGTGCCTATAAATGGCTGGGCTGCTATTAGATTCATGGCTATCAACCCTGGAGTATGGTTTATGCATTGCCATCTAGAACGCCACCTATCTTGGGGCATGGACACTGTGTTTATTGTGAAGAATGGCAAATCCTCAAATGAAACATTACCACCTCCACCTCCAGACATGCCTCCTTGTTAA 1707 0.4171 MPFGKKMFLQILWCFIVSLFIELSSQTPTHHYNFVVKEANYTRLCSTKSILTVNGKFPGPTIRVHKGDTIYVNVYNRGKYNLTIHWHGVKQPRNPWTDGPEYITQCPIQPGGKFRQKVVFSTEEGTLWWHAHSDWSRATVHGAIIIYPSHNTTYPFSKPDAEVPIIFGEWWKSDVNKVFTEFIESGGGPNVSDAITINGQPGDLFPCSRSETFKINVEQGKTYLLRIVNAAMNLILFFSVSNHNLTVVGADAMYTKPLTSSYICIAPGQTMDALLHANQEPNHYYMAARAYSTLTGFDNTTATARIHYRGNHTPPPSSSPSLPNLPNYNDTKSAFGFIRSIKGIPRKYPYILPKKCSTNILTTVSVNTIPCPKNQSCEGPNGAKLAASMNNISFESPSIDILEAYYYHINGVYKKGFPSIPPELFNFTSDSLSLAMAGTKKGTKVKVLEYGSTVEIVFQGTNLVAGVDHPMHLHGFSFHVVGYGFGNFNRSKDPKDYNLIDPPLRNTVIVPINGWAAIRFMAINPGVWFMHCHLERHLSWGMDTVFIVKNGKSSNETLPPPPPDMPPC* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2079 568 CDD CuRO_1_LCC_plant 32 148 IPR034288 GO:0005507
Aev09g2079 568 SUPERFAMILY Cupredoxins 381 568 IPR008972 -
Aev09g2079 568 SUPERFAMILY Cupredoxins 156 338 IPR008972 -
Aev09g2079 568 CDD CuRO_2_LCC_plant 163 308 IPR034285 -
Aev09g2079 568 Pfam Multicopper oxidase 162 311 IPR001117 -
Aev09g2079 568 ProSitePatterns Multicopper oxidases signature 1. 526 546 IPR033138 -
Aev09g2079 568 Gene3D - 372 568 IPR008972 -
Aev09g2079 568 ProSitePatterns Multicopper oxidases signature 2. 531 542 IPR002355 GO:0005507
Aev09g2079 568 CDD CuRO_3_LCC_plant 412 551 IPR034289 GO:0005507
Aev09g2079 568 Gene3D - 158 344 IPR008972 -
Aev09g2079 568 PANTHER LACCASE-15 35 568 - -
Aev09g2079 568 PANTHER MULTI-COPPER OXIDASE 35 568 IPR045087 -
Aev09g2079 568 Pfam Multicopper oxidase 36 149 IPR011707 GO:0005507
Aev09g2079 568 TIGRFAM laccase: laccase 29 568 IPR017761 GO:0046274|GO:0048046|GO:0052716
Aev09g2079 568 Gene3D - 17 148 IPR008972 -
Aev09g2079 568 SUPERFAMILY Cupredoxins 25 172 IPR008972 -
Aev09g2079 568 Pfam Multicopper oxidase 421 551 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2079 Aev-Chr9 23960015 23963650 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2079 K05909 K19791 gmx:100808617 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2079 09 23960015 23963650 Aev09g2079 09 23960015 23963650 ECH