Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0700 ATGAACTACAGGCGTCTGATTTCCTGCCGGGGTTGGCTTTTCCGGTGGCTGTGCACCGCAGCGACGAAGGAGGCTGAGCCTCCGGAAAATAAGGTAACTCTGTATCGGAAACTATCGGCGCTGGACGTTACCGGACAGAGCGTGTCGCAGACGCTGAACCAGTACGTAATGGAAGGCAAAGCCATCAGAAAAGATGAGCTCGTTAGGTGTGTCCAGCAGCTCCGGAAGTATCGCAAATTCCAGCATGCACTTGAGATAATGGAATGGTTGGAGATGAGAAAAATTTATTTTTCCTTGATTGATTATGCTGTGTATTTGGATCTTGTATCCAAAACCAAAGGGGTTGTTGCAGCTGAGAATTACTTTAGCGGTCTTCCACCTCGAGCCAAGAACAAGTTCACATACGGTGCCCTTTTGAACTGCTTCTGCAAGGAACTAATGGTAGACAAGGCATTGGCCCATTTCAAAAAGATGGATGAATTACAATATGTCACTAATCTGTCTTTCAACAATTTGATGAATATGCATATGAAGCTGGGTCAGCCTGGGAAAGTTCCTCAGCTGGTGGAAGATCTGAAGCAGAGGAAGATTCCTATGTCTTCATATATATATCATATCTGGATGAATAGCCTCGCGTCTTCGAACGATCTTGAAGGGGCCGAAAGAGTCTTTGAAGAGATGAAAAGAGATGATGAAGATAAAATTGATTGGCATACATATTGCAGCCTTGCTTCTTTCTATGTGAAGGCCAAACAGTTTGAGAAAGCCGAATCAATGCTTAAGATGCTAGAAAAAGAGGTGAAACCCTCGCAGCGCGAAGCTTACCATTTCTTGCTATATCTCTATGCAGGGACTTCTAATCAAGGAGAGGTTTATAGGGTGTGGGACTCCCTCAAGTCAGTGACGCCAGTGACGAACACAAGTTATCTGACCATGCTCCGTGTCCTTAGGAAGCTCAATGATATGGAGGGGATAACAAACTGCTTCAAGGAGTGGCAATCTAGTTGTTCAATTTATGATATAAGGTTGGCCAATATTGGTATCAGTGCTTACTTGAGGCAGAACTTGTATGAAGAAGCTGTATCAGTCTTTGAAGAGGCTACAAGGAAGAGCGACGGACCTTTATTTAAGATTCGCGAAATGTTCATGATTTTCTTCTTGGAGAAACATCAGTTGGACGATGCGGTGAGCCATATGGAGGCATTACTTCCCAGAACTGGGAGCGGTGAATGGCGCCCTGCACGGGAAGTTATAAGTGCTTTTCTGAAGTATTATGAAGAGAAAGGTCTTGATGGCGTTGAGGAGTTATGCAAGATTGTCAAGCCTTACAATAAAGATGATTTGTGGCTTAGGACTTACATTACTGCATCTAACTCCTCTCCTGAAACTAGTCAAATGTCGAAGGAAGATATTTTGCAGCATGTAGATGCAATTTATTGA 1440 0.4375 MNYRRLISCRGWLFRWLCTAATKEAEPPENKVTLYRKLSALDVTGQSVSQTLNQYVMEGKAIRKDELVRCVQQLRKYRKFQHALEIMEWLEMRKIYFSLIDYAVYLDLVSKTKGVVAAENYFSGLPPRAKNKFTYGALLNCFCKELMVDKALAHFKKMDELQYVTNLSFNNLMNMHMKLGQPGKVPQLVEDLKQRKIPMSSYIYHIWMNSLASSNDLEGAERVFEEMKRDDEDKIDWHTYCSLASFYVKAKQFEKAESMLKMLEKEVKPSQREAYHFLLYLYAGTSNQGEVYRVWDSLKSVTPVTNTSYLTMLRVLRKLNDMEGITNCFKEWQSSCSIYDIRLANIGISAYLRQNLYEEAVSVFEEATRKSDGPLFKIREMFMIFFLEKHQLDDAVSHMEALLPRTGSGEWRPAREVISAFLKYYEEKGLDGVEELCKIVKPYNKDDLWLRTYITASNSSPETSQMSKEDILQHVDAIY* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0700 479 PANTHER OS12G0527900 PROTEIN 3 471 - -
Aev09g0700 479 PANTHER OS01G0301500 PROTEIN 3 471 - -
Aev09g0700 479 Gene3D Tetratricopeptide repeat domain 165 302 IPR011990 GO:0005515
Aev09g0700 479 Pfam PPR repeat 168 196 IPR002885 -
Aev09g0700 479 Pfam PPR repeat 133 160 IPR002885 -
Aev09g0700 479 Pfam PPR repeat 239 265 IPR002885 -
Aev09g0700 479 Pfam PPR repeat 203 230 IPR002885 -
Aev09g0700 479 Pfam Tetratricopeptide repeat 349 373 IPR019734 GO:0005515
Aev09g0700 479 Gene3D Tetratricopeptide repeat domain 31 164 IPR011990 GO:0005515
Aev09g0700 479 TIGRFAM PPR: pentatricopeptide repeat domain 133 160 IPR002885 -
Aev09g0700 479 TIGRFAM PPR: pentatricopeptide repeat domain 202 231 IPR002885 -
Aev09g0700 479 TIGRFAM PPR: pentatricopeptide repeat domain 238 265 IPR002885 -
Aev09g0700 479 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 200 234 IPR002885 -
Aev09g0700 479 SUPERFAMILY TPR-like 198 316 IPR011990 GO:0005515
Aev09g0700 479 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 131 165 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0700 Aev-Chr9 6483065 6485119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0700 33 428 EF-hand Containing Proteins AT1G02150 32.250 9.86e-71 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0700 - - gmx:100781679 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0700 09 6483065 6485119 Aev09g0700 09 6483065 6485119 ECH