Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0673 ATGTTTTTCCCAGGGCTAAACAACAAGCAGAAGATAAAGGGCACAGTGGTGCTTATGAGCAAGAATGTGCTGGACTTCAATGAGATAACGTCAGCTGCTAGCGGCGGTGTTGGGGGCGCAGTTAGGGGCATTTTTGACACCGCCATTGGCGTAACTGGCTCAATAGTTGATGGTGCCACTGCCATTTTCAGCCGTAACATCGCCTTGCAGCTCATCAGTGCTACCAAGACTGATGGACGTGGAAATGGGAAGCTTGGAAAGGAAACGTTTTTGGAGAAACATCTTCCAACGTTACCAACATTGGGAGACAGGCAGGACGCATTCAACATCCATTTTGAGTATGATGCTGAGTTCGGAATTCCAGGAGCATTCTACATTAAGAACTACATGCAAGCTGAGTTCTTCCTTGTTAGTTTGACTCTTGAAGACATTCCCAATCAAGGAACCATCACTTTTGTTTGCAACTCATGGGTTTACAACTTCAAGAGTTACAAAAACACCCGCATCTTCTTTGCTAATAATACATATCTTCCAAGTGAAACTCCAGAGGCACTAGTGAAATACAGAGAAGAAGAATTGGAAAATTTAAGAGGTGATGGAAAAGGCGAAAGAAAGGAATATGATAGGATCTATGATTATGATGTTTACAATGATTTGGGCAACCCAGACCAGAATTCCAAACTTGCTCGCCCTGTTCTTGGAGGCTCTACCACTTATCCTTACCCTCGTAGGGGAAGAACCGGTAGAAGAGCAACAAGAAAAGACTCTAAAAGCGAAGTACCAACCTCGAACACTTACATTCCAAGAGATGAAAACTTTGGTCACTTGAAATCATCAGATTTCCTTACATATGGAATCAAATCTCTGGCACAAAACGTGTTGCCTCAGTTTGAAAGAGTATTTGGTTTAAATGCTGAGTTCGATAGCTTCGACGATGTGCGTAGACTCTTTGACGGTGGAATTTCGCTCCCTACAGATATAATCAGCAAAATTAGCCCTTTGCCCGTCATCAAGGAAATCTTCCGTACTGATGGTGAACAAGTCCTCAAGTTCCCTCCACCTCATGTCATCAAAGTTAGTAAGTCAGCATGGATGACTGATGAAGAATTCGCAAGAGAGATGGTTGCTGGTGTAAATCCTTGCGTAATTCAATGTCTTCAAGAATTCCCACCAAAAAGCAAGCTAGATGTCTCATCCTATGGTGACCATACTAGTACAATATCCAAAGAAAACCTGGAGATTAACATGGGTGGAATCACAGTAGAAGAGGCACTTAATGGACAACGGTTATTCGTATTAGATTACCATGATGCATTCATGCCATACTTGAGGTTGATCAATGAGGAAACTCCTTCAAAGATATATGCCACTAGGACAATCCTTTTCCTGAAAAATGATGGGACTTTGAAGCCACTAGCCATCGAATTAAGTGTCCCACATCCTAACGGATATAAGTTTGGTGCAACCAGTAAAGTCATCCTCCCTGCTGAACATGGTGTTGAAAGTACAATTTGGCTGCTGGCTAAGGCTTATGTCATTGTAAATGATTCAGGCTATCATCAACTCATAAGCCATTGGTTAAATACTCATGCAGCAATGGAGCCATTTGTGATAGCAACAAACAGGCATCTCAGTATACTCCATCCCGTTCATAAACTTCTACTGCCTCACTATCGCGACACGATGAACATCAATGCTCTTGCAAGGCAGTCCTTAATCAACGCAGGTGGCATTATAGAGCAATCATTTTTCCCAGGACAGTTTTCAATGGAGTTGTCCTCTGTAGTTTACAAGAATTGGGTTTTCACTGATCAAGCACTACCTGCTGATCTTATCAAGAGAGGAATGGCAGTTGAGGATCCATCTTCACCCCATGGCCTTCGCCTGCTGATAAAGGACTACCCTTATGCAGTTGATGGACTCGAGATATGGGATGCTATTAAGACATGGGTCCAAGAGTACATCTCCTTGTACTATGCCAATGATGATGCAGTTAGAAATGATTCTGAAATCCAAGAATGGTGGAAGGAAGTTGTAGAGAAAGGTCACGCCGACCTTAAAGATAAGCCATGGTGGCCTAAGATGCAGAGCATTGAAGAGCTTATTCAATCATGCTCCACTATCATATGGATTGGTTCAGCTCTTCATGCAGCTGTTAATTTTGGACAATACCCATATGGAGGATTCATCCTGAACCGTCCAACTCTTACAAGAAAATTGCTCCCTGAGAAAGGAACTAAGGACTATGACGAAATGGTGCAGAATCCTCAAAAGGCTTATCTGAGAACAATCACAAGGAAATATGAGGCACTTGTTGACATTTCAGTGATAGAGATTTTGTCAAGGCATGCCTCTGATGAGATCTACCTTGGGAAGAGGGATAGTCCTTATTGGACCTCTGATTCAAGGGCAATAAATGCCTTCAAGAAATTTGGAACCAAGTTGGAAGAAATTGAGAAGAAAATTGAAGAGAGGAACAATGATTCAAGTTTGAGCAATCGACATGGACCGATTAAGTTGCCATACACTTTGCTTGCTCCTTCTAGCGAAGAAGGATTGACCTTCAGAGGAATTCCCAACAGTATCTCTATCTAA 2595 0.4231 MFFPGLNNKQKIKGTVVLMSKNVLDFNEITSAASGGVGGAVRGIFDTAIGVTGSIVDGATAIFSRNIALQLISATKTDGRGNGKLGKETFLEKHLPTLPTLGDRQDAFNIHFEYDAEFGIPGAFYIKNYMQAEFFLVSLTLEDIPNQGTITFVCNSWVYNFKSYKNTRIFFANNTYLPSETPEALVKYREEELENLRGDGKGERKEYDRIYDYDVYNDLGNPDQNSKLARPVLGGSTTYPYPRRGRTGRRATRKDSKSEVPTSNTYIPRDENFGHLKSSDFLTYGIKSLAQNVLPQFERVFGLNAEFDSFDDVRRLFDGGISLPTDIISKISPLPVIKEIFRTDGEQVLKFPPPHVIKVSKSAWMTDEEFAREMVAGVNPCVIQCLQEFPPKSKLDVSSYGDHTSTISKENLEINMGGITVEEALNGQRLFVLDYHDAFMPYLRLINEETPSKIYATRTILFLKNDGTLKPLAIELSVPHPNGYKFGATSKVILPAEHGVESTIWLLAKAYVIVNDSGYHQLISHWLNTHAAMEPFVIATNRHLSILHPVHKLLLPHYRDTMNINALARQSLINAGGIIEQSFFPGQFSMELSSVVYKNWVFTDQALPADLIKRGMAVEDPSSPHGLRLLIKDYPYAVDGLEIWDAIKTWVQEYISLYYANDDAVRNDSEIQEWWKEVVEKGHADLKDKPWWPKMQSIEELIQSCSTIIWIGSALHAAVNFGQYPYGGFILNRPTLTRKLLPEKGTKDYDEMVQNPQKAYLRTITRKYEALVDISVIEILSRHASDEIYLGKRDSPYWTSDSRAINAFKKFGTKLEEIEKKIEERNNDSSLSNRHGPIKLPYTLLAPSSEEGLTFRGIPNSISI* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0673 864 CDD PLAT_LH2 11 173 IPR042057 -
Aev09g0673 864 SUPERFAMILY Lipoxigenase 177 864 IPR036226 -
Aev09g0673 864 PRINTS Lipoxygenase signature 502 519 IPR013819 GO:0016702|GO:0046872
Aev09g0673 864 PRINTS Lipoxygenase signature 540 560 IPR013819 GO:0016702|GO:0046872
Aev09g0673 864 PRINTS Lipoxygenase signature 520 537 IPR013819 GO:0016702|GO:0046872
Aev09g0673 864 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 175 864 IPR013819 GO:0016702|GO:0046872
Aev09g0673 864 ProSitePatterns Lipoxygenases iron-binding region signature 1. 520 534 IPR020833 GO:0016702|GO:0046872
Aev09g0673 864 PANTHER LIPOXYGENASE 5 864 - -
Aev09g0673 864 Gene3D - 363 497 - -
Aev09g0673 864 MobiDBLite consensus disorder prediction 226 271 - -
Aev09g0673 864 Gene3D PLAT/LH2 domain 3 176 - -
Aev09g0673 864 Pfam PLAT/LH2 domain 80 171 IPR001024 GO:0005515
Aev09g0673 864 Gene3D - 277 362 IPR027433 -
Aev09g0673 864 PRINTS Plant lipoxygenase signature 207 223 IPR001246 GO:0016491
Aev09g0673 864 PRINTS Plant lipoxygenase signature 349 365 IPR001246 GO:0016491
Aev09g0673 864 PRINTS Plant lipoxygenase signature 388 407 IPR001246 GO:0016491
Aev09g0673 864 PRINTS Plant lipoxygenase signature 142 160 IPR001246 GO:0016491
Aev09g0673 864 PRINTS Plant lipoxygenase signature 240 259 IPR001246 GO:0016491
Aev09g0673 864 PRINTS Plant lipoxygenase signature 304 325 IPR001246 GO:0016491
Aev09g0673 864 PRINTS Plant lipoxygenase signature 777 791 IPR001246 GO:0016491
Aev09g0673 864 PRINTS Plant lipoxygenase signature 168 189 IPR001246 GO:0016491
Aev09g0673 864 PRINTS Plant lipoxygenase signature 455 479 IPR001246 GO:0016491
Aev09g0673 864 SMART LH2_4 10 173 IPR001024 GO:0005515
Aev09g0673 864 Gene3D - 498 863 - -
Aev09g0673 864 ProSitePatterns Lipoxygenases iron-binding region signature 2. 547 557 IPR020834 GO:0016702|GO:0046872
Aev09g0673 864 Gene3D - 177 276 - -
Aev09g0673 864 ProSiteProfiles PLAT domain profile. 49 172 IPR001024 GO:0005515
Aev09g0673 864 PANTHER LIPOXYGENASE 5 864 IPR000907 GO:0016702|GO:0046872
Aev09g0673 864 Pfam Lipoxygenase 185 847 IPR013819 GO:0016702|GO:0046872
Aev09g0673 864 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 10 176 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0673 Aev-Chr9 6078755 6088630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0673 10 864 Acyl Lipid Metabolism Gene Families AT1G55020 57.488 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0673 K15718 - gmx:100127399 1387.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1694 10 19234461 19238440 Aev09g0673 09 6078755 6088630 PCT