Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0634 ATGCTTCAAATTCTCTTCCTCCTCCCTCTGCTCTTATCCACTTCCTCAACCCAAGCCTTAGTGGAGGACTTCTGTGTCGCGGATCTTAAGGCTCAAAATGGCCCTGCAGGGTACCCCTGCAAGGCCCCGGCAAACGTAACAGCAAATGACTTTCACTACACAGGGTTAGCCAAACCAGCAAAACTCCTAGCACTGATCAACGCTGCAGTTACCCCTGCATTTGTTGGTCAGTTCCCAGGAGTCAATGGTCTTGGCCTCTCCGCTGCGAGGCTAGACTTTGGCCCTAACGGTGTTATCCCATTGCACACTCATCCTGGTGCCTCTGAGCTCCTAATTGTGGAAAAGGGTAGTATTTCTGCTGGCTTCATTTCTTCTGATAATACTTATTATGCTAAGGTACTTAATCAAGGTGACATTATGGTTTTCCCTCAAGGCTTGTTGCATTTTCAGTTCTCTAACGGCGGAAAAGGTGCCGTCGCTTTCGCCGTCTTTAGTAGCTCCAGTCCTGGCCTTCAGATCCTTGATTTTGCTTTGTTTGCAAATAATTTCCCTACTGAATTGGTGGCAAAAACTACTTTCCTTGACCCTGCTCTTATTAAGAAGCTTAAGGGTGTTCTTGGTGGCAGTGGCTAG 633 0.4755 MLQILFLLPLLLSTSSTQALVEDFCVADLKAQNGPAGYPCKAPANVTANDFHYTGLAKPAKLLALINAAVTPAFVGQFPGVNGLGLSAARLDFGPNGVIPLHTHPGASELLIVEKGSISAGFISSDNTYYAKVLNQGDIMVFPQGLLHFQFSNGGKGAVAFAVFSSSSPGLQILDFALFANNFPTELVAKTTFLDPALIKKLKGVLGGSG* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0634 210 PRINTS Germin signature 132 152 IPR001929 GO:0030145
Aev09g0634 210 PRINTS Germin signature 165 180 IPR001929 GO:0030145
Aev09g0634 210 PRINTS Germin signature 102 122 IPR001929 GO:0030145
Aev09g0634 210 CDD cupin_OxOx 19 206 - -
Aev09g0634 210 Pfam Cupin 56 196 IPR006045 -
Aev09g0634 210 SMART Cupin_1_3 54 200 IPR006045 -
Aev09g0634 210 Gene3D Jelly Rolls 17 209 IPR014710 -
Aev09g0634 210 SUPERFAMILY RmlC-like cupins 21 203 IPR011051 -
Aev09g0634 210 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 8 206 - -
Aev09g0634 210 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 8 206 - -
Aev09g0634 210 ProSitePatterns Germin family signature. 97 110 IPR019780 GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0634 Aev-Chr9 5642630 5643262 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0634 18 210 Miscellaneous Gene Families AT1G72610 63.212 2.95e-85 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0634 - - gmx:100500326 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0634 09 5642630 5643262 Aev09g0634 09 5642630 5643262 ECH