Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev09g0571 | ATGAGAAACTTTCGGTTCCATCGATTTTCAACTTTGATTGATGAATCCATTAGTGGTAGCATCCAAAAGAGACCAAGTACTAGGTTTCCAACCACCACCACCACCTCATTTGTACCAATTCCACACCGAACAATCCCTCAGCCGAAAGGCCAAGACCTAGATTTCGTCAATGTTGCACACAGCCACATCATTCACTCACAATGGGAACACCTCCAACCCTTATCACAGTCCCTTACACCTTTCAGGCTCAAGCACATCCTCCTCAAGCTTCGAAACGATGCTGTTTTGTCCCTCCGGTTCACCAAATGGGTCCAAACACACAACCCCAATTCCCAAACCCTTGAAACAAATGCCATCCTCCTCCACACCCTCGCAAAAAACAAGAATTTCAAAGCCTCCCAAACAATCCTCAGGAGAATCATCGCTTCTGGTTCCTTAAACTTGCCTTCTGACCTCTTCGAAGCATTGTTGTACTCTTACCGTTTGTGTGATTCAACACCAAGTGTTTTCGACACCCTTTTCAAGACCCTGGCACACATGAAAAGGATAAGAAACGCCACCGATACCTTTTGTCGAATGAAGGAACATGGGTTCTTTCCCCCTGTAGAGTCCTGTAATGCTTTCATGAGTTCTTTGCTTCAGTTACAAAGACCTGAAATTGTTCTGTTGTTCTACCGTGAAATTAAGAAGTCTTGTGTTTCGGTTAATGTTTACACTCTTAACATGGTTATATGTGCTTATTGCAAGTTAGGGGAGATTCAGAAGGGGTACGAGGTGTTGGAGAAGATGAGGGACATGGGTCTGAGTCCAAATGTTGTGTCTTTTAATGCATTGATTTCTGGGTATTGTAGCAAGGGTATGGTTGGTTTGGCCTTGAAGGTTAAGTCCTTGATGATGGAGAGTAACGGGGTGAAGCCAAATGTGGTTACTTTCAACACAATCATTAATGGGTTTTGTAAGGAGAGGAAATTGCATGAGGCAAACAAGGTTTTTAATGAGATGAAGAGTTGCAATGTGGCTCCTAATACTGTTACATACAATACTTTGATCAATGGGTATAGTCAGGTTGGGAATAGTGAGATGGGGACAAGGCTTTTTGAGGAGATGGGGAAGGATGGGGTTAAGGCTGATATACTTACTTATAATGCATTGATTTTGGGGCTTTGCAAGGAGGGGAAGACGAAGAAGGCTGCGTATCTTGTTAAGGAGCTCGATAAGGAGAACTTGGTCCCGAACTCGTCGACGTTTTCGGCACTGATTTCCGGGCAGTGTGTTAGGAGAAACTCCGAGCGCGCGTATCTTATTTACAGGAGCATGGTGAGGAGCGGTTGCAGTCCGAACGAGCACACTTTCAAGATGTTGGTATCGGCATTCTTGCAGAATGAAGACTTTGATGGAGCTGTGCAGGTCTTGAGGGACATGTTGGAGAGGTTGATAGCTCCTGATTCCGGTGTCCTGTCTGAGCTCATCAGTGGACTTTCCAGGTGTGGGAAAAATCGATTGGCGTCGTTATTGTGTAGTGAGATTGAAGCTAGGAATCTACTGCCAGAAGGTTTTGACAGAGAAATCATAGCCGTAAACAATACAGAAAATGAGACAAATAGTTAA | 1608 | 0.4428 | MRNFRFHRFSTLIDESISGSIQKRPSTRFPTTTTTSFVPIPHRTIPQPKGQDLDFVNVAHSHIIHSQWEHLQPLSQSLTPFRLKHILLKLRNDAVLSLRFTKWVQTHNPNSQTLETNAILLHTLAKNKNFKASQTILRRIIASGSLNLPSDLFEALLYSYRLCDSTPSVFDTLFKTLAHMKRIRNATDTFCRMKEHGFFPPVESCNAFMSSLLQLQRPEIVLLFYREIKKSCVSVNVYTLNMVICAYCKLGEIQKGYEVLEKMRDMGLSPNVVSFNALISGYCSKGMVGLALKVKSLMMESNGVKPNVVTFNTIINGFCKERKLHEANKVFNEMKSCNVAPNTVTYNTLINGYSQVGNSEMGTRLFEEMGKDGVKADILTYNALILGLCKEGKTKKAAYLVKELDKENLVPNSSTFSALISGQCVRRNSERAYLIYRSMVRSGCSPNEHTFKMLVSAFLQNEDFDGAVQVLRDMLERLIAPDSGVLSELISGLSRCGKNRLASLLCSEIEARNLLPEGFDREIIAVNNTENETNS* | 536 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev09g0571 | 535 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 412 | 446 | IPR002885 | - | |
| Aev09g0571 | 535 | PANTHER | ATPASE EXPRESSION PROTEIN 3 | 1 | 531 | - | - | |
| Aev09g0571 | 535 | Gene3D | Tetratricopeptide repeat domain | 153 | 286 | IPR011990 | GO:0005515 | |
| Aev09g0571 | 535 | Gene3D | Tetratricopeptide repeat domain | 287 | 397 | IPR011990 | GO:0005515 | |
| Aev09g0571 | 535 | TIGRFAM | PPR: pentatricopeptide repeat domain | 238 | 272 | IPR002885 | - | |
| Aev09g0571 | 535 | TIGRFAM | PPR: pentatricopeptide repeat domain | 344 | 377 | IPR002885 | - | |
| Aev09g0571 | 535 | TIGRFAM | PPR: pentatricopeptide repeat domain | 415 | 448 | IPR002885 | - | |
| Aev09g0571 | 535 | TIGRFAM | PPR: pentatricopeptide repeat domain | 380 | 412 | IPR002885 | - | |
| Aev09g0571 | 535 | TIGRFAM | PPR: pentatricopeptide repeat domain | 273 | 308 | IPR002885 | - | |
| Aev09g0571 | 535 | TIGRFAM | PPR: pentatricopeptide repeat domain | 309 | 343 | IPR002885 | - | |
| Aev09g0571 | 535 | TIGRFAM | PPR: pentatricopeptide repeat domain | 449 | 482 | IPR002885 | - | |
| Aev09g0571 | 535 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 236 | 270 | IPR002885 | - | |
| Aev09g0571 | 535 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 447 | 481 | IPR002885 | - | |
| Aev09g0571 | 535 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 166 | 200 | IPR002885 | - | |
| Aev09g0571 | 535 | Gene3D | Tetratricopeptide repeat domain | 398 | 532 | IPR011990 | GO:0005515 | |
| Aev09g0571 | 535 | Pfam | PPR repeat | 232 | 264 | IPR002885 | - | |
| Aev09g0571 | 535 | Pfam | PPR repeat | 266 | 298 | IPR002885 | - | |
| Aev09g0571 | 535 | PANTHER | PPR CONTAINING PLANT-LIKE PROTEIN | 1 | 531 | - | - | |
| Aev09g0571 | 535 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 377 | 411 | IPR002885 | - | |
| Aev09g0571 | 535 | Pfam | PPR repeat | 450 | 477 | IPR002885 | - | |
| Aev09g0571 | 535 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 307 | 341 | IPR002885 | - | |
| Aev09g0571 | 535 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 342 | 376 | IPR002885 | - | |
| Aev09g0571 | 535 | Pfam | PPR repeat family | 306 | 352 | IPR002885 | - | |
| Aev09g0571 | 535 | Pfam | PPR repeat family | 377 | 424 | IPR002885 | - | |
| Aev09g0571 | 535 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 271 | 306 | IPR002885 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aev09g0571 | 237 | 518 | Glycosyltransferase | AT1G05670 | 31.338 | 1.14e-40 | 154 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev09g0571 | - | - | adu:107464028 | 825.469 |