Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0551 ATGGCAGCCAGAAGCACGACGCATCGCCCAAGCGGGGAGCGCAGGCAGAGTGGGGAGTGCTTGCGGCTAGCACGGGGAGCAAGGAGCGGGGAGATGGTCGTAAGAGAAAGAGATGGAGAAAGTGTCCTCCACCACCACCTTCCCGCCGCAGCCACCACCATCGCAGATAACACCGCCATCGCCGCTGCTGCTGTTGCTCGAAGATCAGTTGTTGTTGCTGCTCCAAGACGCCACTGCTACTTCTATGAGGGCCACGGCCGCCGCCGCTCTGGAAGCTTGATGGAATCAGGGAGGCGGACAGAACTGAAAGTCTCCACGTCCACACCTTTCTCTTTCTTGGTCGCTCCCTCTCAAAAAGAACACCACCATGACAAAGGTGGACAGTGGCTTAAACAGTCATATCTTCATCCTTTGTCAAAGCTTTTCCGCGTCCGCCTTGAAACCGACAAAGAGCACCACCAAGAGCCACAAGCACGAGCACAAGTGAGCGTAAAATGGCAAAAGGAGCTCTTCAAAGACGTAGAAATTGATACTACCCAGCCCCCTTATGTTTTTAAGTGCCAATTGTATGATCTAACTGGGGTGCCTCCTGAAAGACAAAAAATTATGGTCAAGGGTGGTCTGTTAAAGGATGATGCTGATTGGTCAGCGTTGGGAGTGAAAGAGGGTCAAAAGCTAATGATGATGGGAACAGCAGATGAAATTATTAAGTCTCCAGAGAAGGGAACTGTTTTTGTTGAAGATCTTCCTGAAGAAGAACAAGTGGCTGCTGTTGGACATTCAGCTGGCCTTTTCAATTTGGGAAACACTTGTTACATGAACTCAACATTGCAATGCCTGCATTCGGTGCCAGAGTTGAAGTCAGCTTTGATTAATTACTCACATTCAGGAAGAAACAATGATGTTGACCAGTCTTCTCATCTGTTGACAATTGCTACCCGTGATTTATTCAATGAGCTTGATAAAAGTGTGAAGGCTGTGGCACCAATGCAATTTTGGATGGTATTGCGGAAGAAGTACCCTCAATTTGGCCAGCTACATAATGGAGTGTTCATGCAACAGGATGCTGAAGAATGTTGGACACAACTTCTATACACACTTTCTCAGTCTCTCAGATCCCATGGATCAAGTGAAAATCCGGATGCTGTGAAGGCCCTTTTTGGCATCGAACTTATCAGCAGGATTCATTGCCAAGAGAGTAATGAAGAAAGCTCAGAAACAGAATCTGTTTATTCACTTAAATGCCACATATCGCACGAGGTGAACCATTTGCATGAAGGACTAAAACATGGATTAAAATCAGAATTGGAGAAGGCTTCTCCTGCTTTGGGCCGTAGTGCTACTTACTTGAAGGAGTCTCGCATCAATGCCCTGCCAAAGTACTTGACTGTTCAGTTTGTCCGTTTCTTCTGGAAGAGGGAGTCCAACCAAAAGGCTAAGATCTTGCGGAAAGTGGATTATCCTCTGGAGTTGGATGTATATGATCTCTGTTCTGATGATCTTCGTAAAAAGTTGGAAACTCCTAGACAGATCCTAAGAGATGAGGAGGGAAAAAAACTTGGCCTGAAAGTCAGCGAGAAAAGCTCTGCTCCTAAGGATAATGATGAAAAGATGTTGGATGCTGAGGGATCATCAAACGGGGGAGGGGAGCCATCTGTAGCTCCAATGGAGGAAGGTGAAAAAGAAACACAAATGACTGGAGTTTATGATTTAGTTGCTGTATTGACCCACAAGGGTAGAAGTGCTGATTCAGGACATTATGTCGGTTGGGTCAAGCAAGAAAATGGGAAGTGGATAGAGTATGATGATGACAATCCTAAACCAAGAATAGAAGACGATATCACTAAACTATCTGGAGGAGGTGATTGGCATATGGCTTACATTATCATGTACAAGGCTCGTGTTGTATCTGTGTAG 1917 0.4596 MAARSTTHRPSGERRQSGECLRLARGARSGEMVVRERDGESVLHHHLPAAATTIADNTAIAAAAVARRSVVVAAPRRHCYFYEGHGRRRSGSLMESGRRTELKVSTSTPFSFLVAPSQKEHHHDKGGQWLKQSYLHPLSKLFRVRLETDKEHHQEPQARAQVSVKWQKELFKDVEIDTTQPPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDADWSALGVKEGQKLMMMGTADEIIKSPEKGTVFVEDLPEEEQVAAVGHSAGLFNLGNTCYMNSTLQCLHSVPELKSALINYSHSGRNNDVDQSSHLLTIATRDLFNELDKSVKAVAPMQFWMVLRKKYPQFGQLHNGVFMQQDAEECWTQLLYTLSQSLRSHGSSENPDAVKALFGIELISRIHCQESNEESSETESVYSLKCHISHEVNHLHEGLKHGLKSELEKASPALGRSATYLKESRINALPKYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYDLCSDDLRKKLETPRQILRDEEGKKLGLKVSEKSSAPKDNDEKMLDAEGSSNGGGEPSVAPMEEGEKETQMTGVYDLVAVLTHKGRSADSGHYVGWVKQENGKWIEYDDDNPKPRIEDDITKLSGGGDWHMAYIIMYKARVVSV* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0551 638 Pfam Ubiquitin carboxyl-terminal hydrolase 263 631 IPR001394 GO:0004843|GO:0016579
Aev09g0551 638 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 162 637 - -
Aev09g0551 638 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 263 278 IPR018200 GO:0004843|GO:0006511
Aev09g0551 638 Gene3D - 159 231 - -
Aev09g0551 638 CDD Ubl_USP14_like 161 233 - -
Aev09g0551 638 ProSitePatterns Ubiquitin domain signature. 186 211 IPR019954 -
Aev09g0551 638 Gene3D Cysteine proteinases 256 637 - -
Aev09g0551 638 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 162 637 IPR044635 GO:0004843|GO:0016579|GO:0043161
Aev09g0551 638 MobiDBLite consensus disorder prediction 522 561 - -
Aev09g0551 638 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 569 587 IPR018200 GO:0004843|GO:0006511
Aev09g0551 638 SMART ubq_7 160 231 IPR000626 GO:0005515
Aev09g0551 638 CDD Peptidase_C19A 263 632 - -
Aev09g0551 638 Pfam Ubiquitin family 173 231 IPR000626 GO:0005515
Aev09g0551 638 ProSiteProfiles Ubiquitin domain profile. 160 229 IPR000626 GO:0005515
Aev09g0551 638 SUPERFAMILY Ubiquitin-like 159 248 IPR029071 -
Aev09g0551 638 SUPERFAMILY Cysteine proteinases 261 632 IPR038765 -
Aev09g0551 638 MobiDBLite consensus disorder prediction 522 540 - -
Aev09g0551 638 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 262 634 IPR028889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0551 Aev-Chr9 4916048 4930235 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0551 K11843 - gmx:100802120 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0551 09 4916048 4930235 Aev09g0551 09 4916048 4930235 ECH