Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0530 ATGAGCGGAGCAACATCAACACGCTCTTCGTGTCGGGTCTCCCAGACGACGTCAAGGCGCGTGAGATTCACAACCTCTTTCGCCGAAGCCCTGGCTTCGACTCTTGCCAGCTCAAGTACACCGGCCGCGGCAACCAGGCACGTCGTTGCATTTGCTACGTTTTTCAACCATCAATCAGCAGTCGCAGCGTTGCATGCCTTAAATGGCGTGAAATTTGATCCTCAAACTGGTTCTACTTTACATATCGAACTTGCTAGGTCGAACTCAAGGAGGAAGCGTAAGCCAGGTAGTGGAGCCTATGTGGTCATAGATAAAAGGTCTAAAGGGGAGGCCGATGTTCAGGGTTCATCAAGTGATGATGGTGACAGTGACCCTGATGAGCCATCGGGAAGTAGCGGCAACCATGGCGACTTAGCGGCCACAAAAAGTGCTGAGAATACTGTTGGTTCAGACAATGCTATACCTATGGAGCAGCATGAAAAGGGTGCTGATGGAGGACCTTGTTCCACACTTTTCATTGCAAATCTTGGTCCAAACTGTACCGAAGATGAATTGAGGCAAACTTTTTCAGTGTATTCTGGATTCAACATGGTCAAAATGCGTTCTAGAGGAGGAATGCCTGTTGCATTTGCTGATTTTGAGGAAGTTGAACAAGCTACTAAGGTCATGGAGCAGCTTCAGGGAAGCACGCTGTCATCGTCAGATCGTGGCGGCATGCACATAGAGTATCTTCTAATCTAA 741 0.4858 MSGATSTRSSCRVSQTTSRRVRFTTSFAEALASTLASSSTPAAATRHVVAFATFFNHQSAVAALHALNGVKFDPQTGSTLHIELARSNSRRKRKPGSGAYVVIDKRSKGEADVQGSSSDDGDSDPDEPSGSSGNHGDLAATKSAENTVGSDNAIPMEQHEKGADGGPCSTLFIANLGPNCTEDELRQTFSVYSGFNMVKMRSRGGMPVAFADFEEVEQATKVMEQLQGSTLSSSDRGGMHIEYLLI* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0530 246 CDD RRM_scw1_like 167 243 - -
Aev09g0530 246 SMART rrm1_1 170 242 IPR000504 GO:0003723
Aev09g0530 246 SUPERFAMILY RNA-binding domain, RBD 49 231 IPR035979 GO:0003676
Aev09g0530 246 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 171 232 IPR000504 GO:0003723
Aev09g0530 246 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 169 246 IPR000504 GO:0003723
Aev09g0530 246 Gene3D - 6 95 IPR012677 -
Aev09g0530 246 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B 47 238 - -
Aev09g0530 246 MobiDBLite consensus disorder prediction 85 139 - -
Aev09g0530 246 PANTHER RNA-BINDING PROTEIN-RELATED 47 238 - -
Aev09g0530 246 Gene3D - 157 244 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0530 Aev-Chr9 4707276 4710355 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0530 - - gmx:100783764 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0530 09 4707276 4710355 Aev09g0530 09 4707276 4710355 ECH