Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0509 ATGCATCGGTTTTTAGCTTCCAAGCTTGCGTCTTCTACCTCAAAGAACATTATACGTGGTGGGTTTGGTTCAAGGAGAAATTTTGTGACCAAAGATATCAATTTTGGCGTTGGTGCTCGTGCTGCTATACTTCAGGGTGTTACTGAGGTTGCTGATGCTGTTAAAGTCACCATGGGACCTAAGGGTCGCAATGTGATTATTGAGAGGAGTCCTGGGAACCCTAGGGTCACTAAGGATGGTGTGACAGTGGCCAAGAGTATCAAATTCCAAGACAAGTCTAAGAATGTTGGTGCTGATCTTGTAAAGCAGGTGGCTAAGGCTACCAACACTGCTGCTGGAGATGGTACAACTTGTGCAACTGTTTTGACTCAGGCAATACTCACAGAAGGGTGCAAATCGATTGCTGCTGGTGTAAATGTCATGGATTTGCGTAATGGAATAAATAAGGCAGTCGATGCTGTTATTACTGAATTGAAAAGAAGAGCAGTCATGATAAGTACACCGGAGGAAATAGCTCAGGTTGGAACTATATCTGCAAATGGGGAGCGCGAGATCGGAGAAATGATTGCAAAGGCAATGGAAAAAGTTGGAAAGGAGGGAGTCATTACTGTCGCTGATGGGAATACTATGGACAACGAGTTGGAAGTAGTGGAAGGAATGAAGCTTGGACGGGGCTACATTTCACCTTATTTTATTACTGATCAGAAAACCCAGAAATGTGAATTGGATAACCCCTTGATCCTTATACATGACAAGAAAATTTCAAACTTGAATTCATTGTTGAAGATATTGGAGCTGTCAGTAACGAAAAAAAGACCACTCCTGGTTGTTGCGGAAGATGTCGAGAGTGATGCATTGGCTATGCTCATACTCAACAAGCATCATGCTGGGCTTAAGGTTTGTGCTGTAAAAGCTCCTGGTTTTGGGGATAGTAGAAGAGCAAATCTAGATGATCTTGCAATTCTTACCGGAGGAGAGGTCATTACAGAAGAGCGTGGTTTTACTCTTGACAAAGTACTGCCAGAAATGCTTGGCACTGCAAGAAAGGTAACTGTCTCCATTGATGACACTATCGTTCTACATGGAGCTGGGGATAAGAAGCTCATTGAAGAGAGATGTGAAGAGCTCAGGACAGCCATGGATAAGAGTTCCTCCACATTTGATAAAGAAAAAGCACAAGAACGCCTATCAAAACTATCTGGTGGTGTAGCCGTTTTCAAGGTTGGAGGGGCCAGCGAGGCAGAAGTTGGGGAAAGGAAAGATCGGGTGACAGACGCTTTAAATGCCACCAGAGCAGCCGTGGAGGAGGGAATCGTTCCAGGGGGTGGAGTCGCTCTCTTATATGCCACCAAAGTTTTGGAGAACCTCCCAACTCAAAATGAAGATGAGAAAAGAGGAGTCCAGATTATTCAGAACGCACTCAAGGCACCAACTTTCACAATAGCTTCAAATGCTGGTTTTGATGGTGCTTTGATCCAGAGCAAATTGTTGGAACAAGACAATCACAACTTTGGATTTGATGCTGCAAAAGGTGCCTATGTTGATATGGTAATGGCCGGAATTATAGACCCAGTTAAAGTTATTAGAACAGCTTTGATAGACGCCGCGAGCGTCTCATTGCTACTGACAACAACCGAGGCAGCCGTGGTTGAAAATCCCAAAGACAAAAACAAACCTCCTAGCCGAGTACCCGACTTGGATCAGTTGGACCTCTAA 1716 0.4429 MHRFLASKLASSTSKNIIRGGFGSRRNFVTKDINFGVGARAAILQGVTEVADAVKVTMGPKGRNVIIERSPGNPRVTKDGVTVAKSIKFQDKSKNVGADLVKQVAKATNTAAGDGTTCATVLTQAILTEGCKSIAAGVNVMDLRNGINKAVDAVITELKRRAVMISTPEEIAQVGTISANGEREIGEMIAKAMEKVGKEGVITVADGNTMDNELEVVEGMKLGRGYISPYFITDQKTQKCELDNPLILIHDKKISNLNSLLKILELSVTKKRPLLVVAEDVESDALAMLILNKHHAGLKVCAVKAPGFGDSRRANLDDLAILTGGEVITEERGFTLDKVLPEMLGTARKVTVSIDDTIVLHGAGDKKLIEERCEELRTAMDKSSSTFDKEKAQERLSKLSGGVAVFKVGGASEAEVGERKDRVTDALNATRAAVEEGIVPGGGVALLYATKVLENLPTQNEDEKRGVQIIQNALKAPTFTIASNAGFDGALIQSKLLEQDNHNFGFDAAKGAYVDMVMAGIIDPVKVIRTALIDAASVSLLLTTTEAAVVENPKDKNKPPSRVPDLDQLDL* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0509 571 Gene3D - 33 550 IPR027413 -
Aev09g0509 571 PANTHER CHAPERONIN CPN60-2, MITOCHONDRIAL-LIKE 20 563 - -
Aev09g0509 571 Pfam TCP-1/cpn60 chaperonin family 50 551 IPR002423 GO:0005524
Aev09g0509 571 SUPERFAMILY GroEL equatorial domain-like 34 549 IPR027413 -
Aev09g0509 571 Gene3D - 164 437 IPR027410 -
Aev09g0509 571 TIGRFAM GroEL: chaperonin GroL 31 554 IPR001844 GO:0042026|GO:0140662
Aev09g0509 571 ProSitePatterns Chaperonins cpn60 signature. 432 443 IPR018370 GO:0005524|GO:0006457
Aev09g0509 571 Gene3D GroEL 219 400 IPR027409 -
Aev09g0509 571 MobiDBLite consensus disorder prediction 551 571 - -
Aev09g0509 571 SUPERFAMILY GroEL apical domain-like 211 403 IPR027409 -
Aev09g0509 571 Hamap Chaperonin GroEL [groEL]. 29 566 IPR001844 GO:0042026|GO:0140662
Aev09g0509 571 CDD GroEL 31 551 IPR001844 GO:0042026|GO:0140662
Aev09g0509 571 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 20 563 - -
Aev09g0509 571 SUPERFAMILY GroEL-intermediate domain like 165 231 IPR027410 -
Aev09g0509 571 PRINTS 60kDa chaperonin signature 54 80 IPR001844 GO:0042026|GO:0140662
Aev09g0509 571 PRINTS 60kDa chaperonin signature 425 446 IPR001844 GO:0042026|GO:0140662
Aev09g0509 571 PRINTS 60kDa chaperonin signature 377 402 IPR001844 GO:0042026|GO:0140662
Aev09g0509 571 PRINTS 60kDa chaperonin signature 110 137 IPR001844 GO:0042026|GO:0140662
Aev09g0509 571 PRINTS 60kDa chaperonin signature 295 318 IPR001844 GO:0042026|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0509 Aev-Chr9 4533724 4539652 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0509 K04077 - gmx:100787285 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0509 09 4533724 4539652 Aev09g0509 09 4533724 4539652 ECH