Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0485 ATGAGTCTTTTTCCAAACCTTTTTGGTAAAAAGATAACAGGCACAGTTGTGTTAATGCCTAAGAATGTTCTAGATATCAATAGCTTACTTAGTGCTGAGGGGATTATCGATGGTGTTGTGGATGGAGTAACCTCAATATTTGATTCTCTTTCTTCCATTTTGAACAGATCAGTTTCCATCCGATTGATTAGTGCTGATAAAGCTTCTGATTCAAGTGGGAAAGGAAAAATCGGGGATAGGAGTTATTTAGAAGGAGCAATAAATAATTTGCCAACATTGGGAGCTCAACAACAAGCATATAGCATATATTTTGACTATGATTCAAATTTTGGAGTTCCAGGAGCATTTTATATTGATAACTATATGGATAATGAGTTCTTCCTTGTTAGTCTCACTCTTGATGATATCCCAAACCAAGGAACCATCCACTTTGTTTGCAACTCTTGGGTTTACAATTCTAAAACCTATCCAACTCCTCGCATTTTCTTTGCCAATAATAGTTATGTGCCAAGTAAAACACCAGGTGCACTAGTGTACTACAGAGAGGAAGAGTTGAAGAGCCTAAGAGGAAGTGGAACAGGGGTGCGCCAGAGTTGGGAAAGGGTATATGATTATGACACTTACAATGATTTGGGAGACCCTGATAAGGGCCTCTCCTATGCTCGTCCTGTTCTTGGAGGATCTTCCACCTATCCTTATCCTCGTAGGGGAAGAACTGGCAGAAGCCCTACAAAAACAGATCCAAAGAGTGAGAGTAGGAGCAGCAGTGTGTACATCCCAAGAGATGAAGCATTTGGTCACTTGAAATCCTCAGATTTTCTGACATATGGAATAAAGTCAGTGTCACAAGATGTGATCCCGGCATTGCAATCTGTGTTTGACATCAATTTCACACCAAATGAGTTTGATAGCTTTGATGATGTTCGAAATCTCTATGAAGGAGGAATTCAGCTCCCAACAGATTTATTCTCTAAGATTAGTCCTTTGCCTATGTTGAAGGAAATCTTCAGAACTGATGGCGAACAATTCCTCAAATTCCCACCACCTAAAGTCATTCAAGTGAGTAAATCTGCATGGATGACTGATGAGGAATTTGGTAGAGAGATTGTTGCTGGTGTGAACCCTGGCTTGATTCGTAGTCTTCAAGAGTTTCCTCCAAAAAGTAAACTAGACAGTTCAGTCTATGGAGACCATACTAGCACAATAACTAAAGAACAACTAGAGCTGAAATTAGATGGGCTCACTGTAGATCAGGCTCTTCAGAATAAGAAATTGTTCCTGCTAGATCATCATGATGTAATAATTCCCTATTTAAGAAGAATCAACTCAACTTCCACAAAGGCTTATGCTTCAAGGACAATCCTTTTCTTGAAAAATGATGGGACTTTAAAGCCATTGGCTATTGAGTTGAGCTTGCCGAGTCCTCAAGGAGACCAATATGGTGTTGTGAGTAATGTGTACTTGCCAGCAACTGAAGGTGTTGAAAGTACTATTTGGCTATTGGCCAAGGCTTATGTTATTGTAAATGACTCATGCTATCATCAACTTGTTAGTCATTGGCTGAATACTCATGCAGTTGTTGAACCATTTGTGATAGCAACAAACAGACAGCTTAGTGTGCTTCATCCAATTAATAAACTTTTACATCCTCACTACCGAGATACCATGAACATAAATGCACTTGCTAGGGAATCATTGGTTAATGCAGATGGTATTATAGAGAAATCTTTCTTGTGGGGAAGTTATGCCATGGAAATGTCTTCCAAAGTTTACAAGGATTATTGGGTTTTTCCTGATCAAGCTCTACCTAATGATCTTATCAAGAGGGGAATAGCAGAGGAGGATCCATCATCCCCTCATGGTCTTCGTCTCCTAATAGAGGACTACCCTTATGCTGTTGATGGACTTGACATATGGAGTGCCATCAAAACATGGGTCCAAGAATATGTCTCCATATACTACCCGTCAGATGACATAATTCAACAAGACTCTGAGCTCCAATCATGGTGGAATGAGATAGTAAATGTCGGCCACGGCGACAAGAAAGGCGAGTCGTGGTGGTCGAAGATGCAAACTCGTCAAGAACTCATAGAATCATGCAGCACCATCATATGGATTGCGTCGGCACTTCACGCAGCCGTTAATTTTGGGCAGTACCCTTATGGAGGTTTCATCCTGAACAGGCCGACGCTTAGCCGACGATTCATGCCGGAACAGGGGACTCCAGAGTATGATGAGCTTTCTACAAATCCTCAAAAGGCTTATTTAAGAACAATTACACCAAAATTTCAGACTCTGATTGATCTTTCGGTTATAGAGATTTTGTCTAGGCATACCTCTGACGAGTACTATCTTGGACAAAGGGATAGTGAGTATTGGACTTCTAATACAATGGCAATTGAAGCATTCAAGAGGTTTGGGAAAACACTTGCAGGGATTGAGCAAGAACTTGTTCAGAGGAACAATGATGAAACATTGAGGAACAGGGTGGGACCTGTTAGCATGCCTTATACTTTGCTTTATCCTTCAAGTGAAGAGGGGTTGACTTTCAGAGGAATCCCTAATAGCATCTCAATCTGA 2580 0.4066 MSLFPNLFGKKITGTVVLMPKNVLDINSLLSAEGIIDGVVDGVTSIFDSLSSILNRSVSIRLISADKASDSSGKGKIGDRSYLEGAINNLPTLGAQQQAYSIYFDYDSNFGVPGAFYIDNYMDNEFFLVSLTLDDIPNQGTIHFVCNSWVYNSKTYPTPRIFFANNSYVPSKTPGALVYYREEELKSLRGSGTGVRQSWERVYDYDTYNDLGDPDKGLSYARPVLGGSSTYPYPRRGRTGRSPTKTDPKSESRSSSVYIPRDEAFGHLKSSDFLTYGIKSVSQDVIPALQSVFDINFTPNEFDSFDDVRNLYEGGIQLPTDLFSKISPLPMLKEIFRTDGEQFLKFPPPKVIQVSKSAWMTDEEFGREIVAGVNPGLIRSLQEFPPKSKLDSSVYGDHTSTITKEQLELKLDGLTVDQALQNKKLFLLDHHDVIIPYLRRINSTSTKAYASRTILFLKNDGTLKPLAIELSLPSPQGDQYGVVSNVYLPATEGVESTIWLLAKAYVIVNDSCYHQLVSHWLNTHAVVEPFVIATNRQLSVLHPINKLLHPHYRDTMNINALARESLVNADGIIEKSFLWGSYAMEMSSKVYKDYWVFPDQALPNDLIKRGIAEEDPSSPHGLRLLIEDYPYAVDGLDIWSAIKTWVQEYVSIYYPSDDIIQQDSELQSWWNEIVNVGHGDKKGESWWSKMQTRQELIESCSTIIWIASALHAAVNFGQYPYGGFILNRPTLSRRFMPEQGTPEYDELSTNPQKAYLRTITPKFQTLIDLSVIEILSRHTSDEYYLGQRDSEYWTSNTMAIEAFKRFGKTLAGIEQELVQRNNDETLRNRVGPVSMPYTLLYPSSEEGLTFRGIPNSISI* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0485 859 PRINTS Lipoxygenase signature 496 513 IPR013819 GO:0016702|GO:0046872
Aev09g0485 859 PRINTS Lipoxygenase signature 514 531 IPR013819 GO:0016702|GO:0046872
Aev09g0485 859 PRINTS Lipoxygenase signature 534 554 IPR013819 GO:0016702|GO:0046872
Aev09g0485 859 Gene3D - 358 491 - -
Aev09g0485 859 MobiDBLite consensus disorder prediction 219 256 - -
Aev09g0485 859 Gene3D - 492 858 - -
Aev09g0485 859 PRINTS Plant lipoxygenase signature 772 786 IPR001246 GO:0016491
Aev09g0485 859 PRINTS Plant lipoxygenase signature 199 215 IPR001246 GO:0016491
Aev09g0485 859 PRINTS Plant lipoxygenase signature 449 473 IPR001246 GO:0016491
Aev09g0485 859 PRINTS Plant lipoxygenase signature 383 402 IPR001246 GO:0016491
Aev09g0485 859 PRINTS Plant lipoxygenase signature 134 152 IPR001246 GO:0016491
Aev09g0485 859 PRINTS Plant lipoxygenase signature 232 251 IPR001246 GO:0016491
Aev09g0485 859 PRINTS Plant lipoxygenase signature 160 181 IPR001246 GO:0016491
Aev09g0485 859 PRINTS Plant lipoxygenase signature 299 320 IPR001246 GO:0016491
Aev09g0485 859 PRINTS Plant lipoxygenase signature 344 360 IPR001246 GO:0016491
Aev09g0485 859 ProSitePatterns Lipoxygenases iron-binding region signature 2. 541 551 IPR020834 GO:0016702|GO:0046872
Aev09g0485 859 ProSiteProfiles PLAT domain profile. 36 164 IPR001024 GO:0005515
Aev09g0485 859 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 167 859 IPR013819 GO:0016702|GO:0046872
Aev09g0485 859 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE-3 9 859 - -
Aev09g0485 859 Pfam Lipoxygenase 177 842 IPR013819 GO:0016702|GO:0046872
Aev09g0485 859 Pfam PLAT/LH2 domain 71 163 IPR001024 GO:0005515
Aev09g0485 859 Gene3D PLAT/LH2 domain 7 168 - -
Aev09g0485 859 Gene3D - 169 268 - -
Aev09g0485 859 SMART LH2_4 10 165 IPR001024 GO:0005515
Aev09g0485 859 Gene3D - 269 357 IPR027433 -
Aev09g0485 859 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 10 168 IPR036392 GO:0005515
Aev09g0485 859 ProSitePatterns Lipoxygenases iron-binding region signature 1. 514 528 IPR020833 GO:0016702|GO:0046872
Aev09g0485 859 CDD PLAT_LH2 10 165 IPR042057 -
Aev09g0485 859 PANTHER LIPOXYGENASE 9 859 IPR000907 GO:0016702|GO:0046872
Aev09g0485 859 SUPERFAMILY Lipoxigenase 170 859 IPR036226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0485 Aev-Chr9 4309439 4318504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0485 10 859 Acyl Lipid Metabolism Gene Families AT1G55020 58.605 0.0 1059
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0485 K15718 - gmx:547869 1323.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1693 10 19221859 19226436 Aev09g0485 09 4309439 4318504 PCT