Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0484 ATGTTGAACATTTTTGGGAGTAGCACCAAAATCAAAGGCACAGTTGTGCTTATGCCAAAGAGTTTGTTGGATATCAACACCATACAAAGTGTTGAAGGGATTGTTGACAACACAATTGATGAAATTGGATCATTGTTTGATTCATTTACTTCAATCTTTGGCCGTTCTGTGGCATTTCAGCTTATTAGTGCTACCAAAGCTGATTTACTTGGGAGAGGAAAAGTTGGGAGTACAGCATATTTGGAAGGAGCAATAATAAATCTGCCAACACTGGGAGCTGGACAAAGTGCATTCAGTGTGAATTTTGATTATGATCCAAATTTTGGAATTCCTGGAGCATTCTATATCAAGAACTATCTCAACACTGAGTTTTTTCTTGTGAGTTTGACTCTTGAGGATATTCCAAACCAAGGAACCATTCACTTTGTTTGCAACTCATGGGTTTACAATTCCACTAAGTATTCAAGTGATCGCATTTTCTTTGCCAACAATACATACCTACCAGGGGGAACACCAGGTGCACTAGTGTACTACAGAGAACAAGAATTGAAGAACTTAAGAGGAAATGGGACAGGGATTCGCAAGGAATGGGACAGAATCTATGATTATGCACTTTACAATGATTTGGGTGACCCTGATAGAGGTTCAGCCTATGCTCGTCCTGTTCTTGGAGGATCTTCCACCTATCCTTATCCTCGCAGGGGAAGAACCGGCAGAAACCCTACAAAATCAGATCCAAACACAGAGAGTAAGGGGGATATAGTGTATGTGCCAAGAGATGAAGCATTCGGACACTTGAAATCCTCAGATTTCCTTGCATTTGGGCTGAAGTCAATATCACAAGATGTGATCCCAGCATTAGAGTCAGTGTTCGACTTGAACTTCACTCCAAATGAGTTTGATAGCTTCGAAGAAGTGCATGATCTGTATGAAGGTGGCATCAAGCTGCCCACAGATTTCATCAGCCAGATCAGTCCCTTACCCGTCTTGAAGGAAATCTTTCGAACTGATGGTGAATCCTTCCTCAAGTATCCACCCCCTAAAGTTGTTCAAGTGAGTAAGTCTGCATGGATGACTGATGAAGAATTTGGACGGGAGGTTCTTGCTGGTGTAAACCCTTGCTTAGTTCGCTGTCTTCAAGAGTTTCCTCCAAAAAGCAAGCTAGATAGCAAAGTCTATGGTGATCAAAATAGCACAATAACCAAAGAACATTTAGTGCCGAATTTAGATGGGCTCACCGTAGATGAGGCTATCCAGCAAAAGAAATTGTTCCTACTAGACGACCATGATGTAATAATACCATATTTGAGGAGAATAAACTCAACAAGCTCAAAAGCATATGCTACTAGAACCATCCTTTTGTTGAAGGGTGATGGAACTTTGAGGCCAATAGCGATTGAGTTGAGTTTGCCAAATCCTCAAGGAGACCAATTTGGTGCGATTAGTAATGTCTACTTGCCTGCTCAAGAAGGTGTTGATGCTAATATTTGGCTTCTCGCTAAGGCTTATGTCATCGTTAATGATTCAAACTATCATCAGCTTATCAGCCATTGGTTGAATACTCATGCAGTTGTAGAGCCATTTGTGATAGCATCAAACAGACAACTAAGTGTACTTCACCCAATTTATAAGCTTCTGTTTCCTCATTTCCGTGACACTATGAACATAAATGCACTTGCAAGGAAGCAACTCATCAATGCCGATGGTATTATAGAGAAAACTTTCTTGCCCGGAAAGTATGCTATGGAAATGTCTTCAGCTATTTATAAGAATTGGGTTTTCCCTCATCAAGCTTTACCACTTGATCTTATCAACAGAGGAATGGCAGTGGAGGATCCAACATCCCCCAATGGTGTTCGCCTTGTGTTAGAGGACTATCCTTATGCTGTTGATGGACTAGACATATGGGGTGCCATTAGCACATGGGTCCAAGACTATGTCTCTCTATACTACCCTTCAGACGACACGGTCAAGCAAGACACCGAGCTCCAATTATGGTGGAAAGAGCTCGTCGAGGTCGGCCACGGCGACAAGAAAGCCGAGCTATGGTGGCCGAAGATGCAAACTCGCCAAGACCTCATCCAAGTTTGCACAATTGTAATATGGACGGCTTCGGCGCTCCATGCCTCTGTCAATTTCGGGCAGTACCCATACGGCGGTTTCATCCTGAACCGCCCAACAATAAGTAGGCGGTTCATGCCGGCGTTGGGTACTGCAGAATATAACGAACTGGCAAATAATCCTCAAAAAGCTTATCTGAGAACGATTACTCCAAAGCTTCAGACTCTGATAGATCTTTCGGTTATAGAGATTCTGTCTAGGCATGCCTCTGATGAGTATTACCTTGGACAAAGGGATAGTGCTGAATTTTGGACTTCTGATACAAAGGCAATTGAGGCATTTAAGAAGTTTGGGAAGAAGTTAGCTGAAATTGAGGGGCAATTGATACAGAGAAATTCTGATGACACATTGAGAAACAGAGTTGGACCTGTTAGTATGCCTTATACTATACTTTATCCAACAAGTAATGAAGGGTTGACTTTTAGAGGAATTCCCAATAGTATCTCTATCTAG 2574 0.4207 MLNIFGSSTKIKGTVVLMPKSLLDINTIQSVEGIVDNTIDEIGSLFDSFTSIFGRSVAFQLISATKADLLGRGKVGSTAYLEGAIINLPTLGAGQSAFSVNFDYDPNFGIPGAFYIKNYLNTEFFLVSLTLEDIPNQGTIHFVCNSWVYNSTKYSSDRIFFANNTYLPGGTPGALVYYREQELKNLRGNGTGIRKEWDRIYDYALYNDLGDPDRGSAYARPVLGGSSTYPYPRRGRTGRNPTKSDPNTESKGDIVYVPRDEAFGHLKSSDFLAFGLKSISQDVIPALESVFDLNFTPNEFDSFEEVHDLYEGGIKLPTDFISQISPLPVLKEIFRTDGESFLKYPPPKVVQVSKSAWMTDEEFGREVLAGVNPCLVRCLQEFPPKSKLDSKVYGDQNSTITKEHLVPNLDGLTVDEAIQQKKLFLLDDHDVIIPYLRRINSTSSKAYATRTILLLKGDGTLRPIAIELSLPNPQGDQFGAISNVYLPAQEGVDANIWLLAKAYVIVNDSNYHQLISHWLNTHAVVEPFVIASNRQLSVLHPIYKLLFPHFRDTMNINALARKQLINADGIIEKTFLPGKYAMEMSSAIYKNWVFPHQALPLDLINRGMAVEDPTSPNGVRLVLEDYPYAVDGLDIWGAISTWVQDYVSLYYPSDDTVKQDTELQLWWKELVEVGHGDKKAELWWPKMQTRQDLIQVCTIVIWTASALHASVNFGQYPYGGFILNRPTISRRFMPALGTAEYNELANNPQKAYLRTITPKLQTLIDLSVIEILSRHASDEYYLGQRDSAEFWTSDTKAIEAFKKFGKKLAEIEGQLIQRNSDDTLRNRVGPVSMPYTILYPTSNEGLTFRGIPNSISI* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0484 857 Gene3D - 490 856 - -
Aev09g0484 857 ProSitePatterns Lipoxygenases iron-binding region signature 2. 539 549 IPR020834 GO:0016702|GO:0046872
Aev09g0484 857 PRINTS Plant lipoxygenase signature 769 783 IPR001246 GO:0016491
Aev09g0484 857 PRINTS Plant lipoxygenase signature 197 213 IPR001246 GO:0016491
Aev09g0484 857 PRINTS Plant lipoxygenase signature 342 358 IPR001246 GO:0016491
Aev09g0484 857 PRINTS Plant lipoxygenase signature 381 400 IPR001246 GO:0016491
Aev09g0484 857 PRINTS Plant lipoxygenase signature 297 318 IPR001246 GO:0016491
Aev09g0484 857 PRINTS Plant lipoxygenase signature 447 471 IPR001246 GO:0016491
Aev09g0484 857 PRINTS Plant lipoxygenase signature 158 179 IPR001246 GO:0016491
Aev09g0484 857 PRINTS Plant lipoxygenase signature 132 150 IPR001246 GO:0016491
Aev09g0484 857 PRINTS Plant lipoxygenase signature 230 249 IPR001246 GO:0016491
Aev09g0484 857 Gene3D PLAT/LH2 domain 2 166 - -
Aev09g0484 857 Gene3D - 267 355 IPR027433 -
Aev09g0484 857 PANTHER LIPOXYGENASE 6 857 IPR000907 GO:0016702|GO:0046872
Aev09g0484 857 SMART LH2_4 9 163 IPR001024 GO:0005515
Aev09g0484 857 Gene3D - 167 266 - -
Aev09g0484 857 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE-3 6 857 - -
Aev09g0484 857 Pfam PLAT/LH2 domain 69 161 IPR001024 GO:0005515
Aev09g0484 857 PRINTS Lipoxygenase signature 494 511 IPR013819 GO:0016702|GO:0046872
Aev09g0484 857 PRINTS Lipoxygenase signature 512 529 IPR013819 GO:0016702|GO:0046872
Aev09g0484 857 PRINTS Lipoxygenase signature 532 552 IPR013819 GO:0016702|GO:0046872
Aev09g0484 857 Gene3D - 356 489 - -
Aev09g0484 857 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 165 857 IPR013819 GO:0016702|GO:0046872
Aev09g0484 857 SUPERFAMILY Lipoxigenase 168 857 IPR036226 -
Aev09g0484 857 CDD PLAT_LH2 9 163 IPR042057 -
Aev09g0484 857 ProSiteProfiles PLAT domain profile. 34 162 IPR001024 GO:0005515
Aev09g0484 857 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 9 166 IPR036392 GO:0005515
Aev09g0484 857 ProSitePatterns Lipoxygenases iron-binding region signature 1. 512 526 IPR020833 GO:0016702|GO:0046872
Aev09g0484 857 Pfam Lipoxygenase 175 840 IPR013819 GO:0016702|GO:0046872
Aev09g0484 857 MobiDBLite consensus disorder prediction 224 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0484 Aev-Chr9 4297406 4306511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0484 7 857 Acyl Lipid Metabolism Gene Families AT1G55020 58.980 0.0 1060
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0484 K15718 - gmx:547869 1320.84