Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0463 ATGAAGCAGAGAGTAACAGCAGAAGCGGTGATGAAGAAGAAGAAGAAGAAGCAAAGGAGTGCTACCTACACTCTCTTCTTCTCCGAGATGCTTCTTCAACTTCAAGCTTGTTCTTCTTCTCACTCTTTCTTCTCATCTTCCTTCTCTTCTTACTCCACAACTCCCATCCCCTTCAAACCCTGCACCCTCTCCCTCTCGCACGCGCAAATCACGTGCCCCCAGAGGAGCCTCTCTGTCACGTGCGCCGCTTCAAAGACCAAGACCAAGACCAAGACCCGAAGCAGTAATGGCGGAACCACCGTGGGCCAAAATCGAAGACCCGTTGAAAGGTGGTTGGGTATATGCAAGAGGATATCGTTGGTGCAGCAAGAAAAAGAAGAACTTGGTGCTGCTTGTTCTGCTTCTGCCACTGTTTTGAATAATTGGGAGAATGAAGGGAAATGGGTCACTAAATGGGAGCTTTGTAGGGTTGTTAAAGAGTTGAGGAAATTTAACAGACATAAAAGAGCCCTTGAGGTATATGATTGGATGAACAATAGACCTGAGAGATTTAGAGAATCTCCAAGCGATGTCGCAATTCAGTTAGATCTAATTGCCAAAGTTCATGGAGTTTCGATTGCAGAAGAATATTTTCAGAAATTGTCTGATAAGTTAAAAATTCGGAGGACGTACGGAGCACTTCTAAATGTATACGTGCATTCTAGATTGAAGGAGAAGGCAGAATCTTTGTTCGATATAATGAGGAGTAAAGGGTTTGCAACACAGTCACTAACATTCAATGTAATGATGACTCTGTACATGAACCTAAAGGATTATGATAAAGTTGATACGTTGATTTCAGATATGACGAAAAACAATATACCACTAGATCTCTATTCATATAATATCTGGCTTTCTTCTTGTGGATCTCAAGGGTCATTAGAAAAGATGGAACAAGTGTTTGAGCAGATGGAAAAGGATCCTAAAGTTGTTCCTAACTGCACTACATTCAGCACAATGGCTACAATCTACATTAAGATGCATCTGTTTGAAAAAGCAGAAGAGTGCATAAGAAATTTTGAGGATAGAATCGAAGGCCGGGATAGACTACCACTTCATTATCTCCTGAGTTTATATGGAAGTATTGGGAAGAAAGACGAAGTTTATCGCGTGTGGAATACCTATAAGTTGAATTTTCCCAGTATACCGAACTTGGGATACCATGCTGTTATTTCTTCTCTGGTTCGAATGGATGATATCGAGGGTGCGGAAAATATTTATAAGGAATGGCTTTCAGCAAAATCATCTTATGATCCTAGAATAGGTAACCTTCTCATAAGCTGGTATGTTAGAAAAGGCAATACAGATAAAGCTCTGAAGTTCTATGAGCGGATGACCGAAGATGGCGGAACTCCAAATCCGAGTTCATGGGAGCTTCTTTCTATGGGGCATATCGCAGATAAGAAGATATCTGAGGCCTTATCCTGCTTGAAAGAAGCTCTTATGGCTGATGGTTCAAAAAGTTGGAGACCAAACCGCGCAAACTTGTCTGCATTCTTTGAGCTTTGTCGGGACCAAGACGATGCCGAAAGCGCTGAGATTTTAACTGGAATGTTGAGGCAGTCAAAATTTGCTAAGGATGAATTTTATGCATCACTCATTGGCTTTTCTGATGGTACCATTGACAAAGGGGAAGAGTCAAATTCTGCAGATAGAACTGATGGTATCAATGAAAATGAAAGCATAGATTCTGAAATGTTGTTCAACCAGCTGGAGAGTAGCTTTTGA 1767 0.4131 MKQRVTAEAVMKKKKKKQRSATYTLFFSEMLLQLQACSSSHSFFSSSFSSYSTTPIPFKPCTLSLSHAQITCPQRSLSVTCAASKTKTKTKTRSSNGGTTVGQNRRPVERWLGICKRISLVQQEKEELGAACSASATVLNNWENEGKWVTKWELCRVVKELRKFNRHKRALEVYDWMNNRPERFRESPSDVAIQLDLIAKVHGVSIAEEYFQKLSDKLKIRRTYGALLNVYVHSRLKEKAESLFDIMRSKGFATQSLTFNVMMTLYMNLKDYDKVDTLISDMTKNNIPLDLYSYNIWLSSCGSQGSLEKMEQVFEQMEKDPKVVPNCTTFSTMATIYIKMHLFEKAEECIRNFEDRIEGRDRLPLHYLLSLYGSIGKKDEVYRVWNTYKLNFPSIPNLGYHAVISSLVRMDDIEGAENIYKEWLSAKSSYDPRIGNLLISWYVRKGNTDKALKFYERMTEDGGTPNPSSWELLSMGHIADKKISEALSCLKEALMADGSKSWRPNRANLSAFFELCRDQDDAESAEILTGMLRQSKFAKDEFYASLIGFSDGTIDKGEESNSADRTDGINENESIDSEMLFNQLESSF* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0463 588 MobiDBLite consensus disorder prediction 557 572 - -
Aev09g0463 588 PANTHER OS12G0527900 PROTEIN 84 549 - -
Aev09g0463 588 MobiDBLite consensus disorder prediction 555 576 - -
Aev09g0463 588 Pfam PPR repeat 223 252 IPR002885 -
Aev09g0463 588 Pfam PPR repeat 436 462 IPR002885 -
Aev09g0463 588 Pfam PPR repeat 400 424 IPR002885 -
Aev09g0463 588 Gene3D Tetratricopeptide repeat domain 116 272 IPR011990 GO:0005515
Aev09g0463 588 Gene3D Tetratricopeptide repeat domain 393 529 IPR011990 GO:0005515
Aev09g0463 588 Pfam Pentatricopeptide repeat domain 278 336 IPR002885 -
Aev09g0463 588 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 290 320 IPR002885 -
Aev09g0463 588 PANTHER OSJNBB0038F03.9 PROTEIN 84 549 - -
Aev09g0463 588 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 431 465 IPR002885 -
Aev09g0463 588 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 220 254 IPR002885 -
Aev09g0463 588 Gene3D Tetratricopeptide repeat domain 273 392 IPR011990 GO:0005515
Aev09g0463 588 TIGRFAM PPR: pentatricopeptide repeat domain 258 290 IPR002885 -
Aev09g0463 588 TIGRFAM PPR: pentatricopeptide repeat domain 292 327 IPR002885 -
Aev09g0463 588 TIGRFAM PPR: pentatricopeptide repeat domain 436 466 IPR002885 -
Aev09g0463 588 TIGRFAM PPR: pentatricopeptide repeat domain 223 252 IPR002885 -
Aev09g0463 588 SUPERFAMILY TPR-like 403 494 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0463 Aev-Chr9 4084146 4088531 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0463 60 588 EF-hand Containing Proteins AT1G02150 52.166 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0463 - - gmx:100780408 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0463 09 4084146 4088531 Aev06g0428 06 3073111 3074238 PCT