Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0462 ATGTTCATATACAATTCTAACCTCTCAATTCAGAAATTTCAAAGCTCATATCCCAATTTGAATTCTTCCACTCAAATCTCACCAAAACAGGATAATGTTCCCACCATGAAACATGAATTGCATACAAACCTTAAAGAAACACAACAAATACATTGCAACTTCATCAAAACTTCTTGTTGTTCCAATAATTCTAGTTACAAACTCCATTTTCCTGCACTTGAATCCTATTCTAGCAATGCAGCACTTTACAGCTTCCTTATATCATCTTACATCAAGAACAATTGCCCTGAATCTGCAGCAAAAATCTATGTCCATATGCGCCAAAAAGGCGCTGAAATCGATAATTTCATCATTCCATCAGTTCTCAAAGCTTGCTGTCTTGTAAATTCAGCCCTGCTAGGACAAGAGGTGCATGGTTTTGCAGTGAAGAGTGGATTCCACCGCGATGTTTTCGTGTGCAACGCGTTGATGGCTATGTACAATGAGATTGTGAACGTGTCACTATCGCGGTTATTTTTTGATAAGATTGAGAGAAGAGATTCTGTTTCTTGGAGTACTATGATTAGGAACTATAGTAGGAATGGTATGCTTGTTGAAGCAATGGATCTTCTAAGAGAAATGTATGTTCTTGAAGTGAAACCTAGTGAAACTGCGATCATAAGCATCCTTCATGTAATAGCAGAACTTGGTGATCTGAAATTGGGGAAAGTAATGCATGCTTATGCCATGAGGAACATGAATTATGGGAAATTTGGAGTTTCTCTGAGTACTGCTTTGATAGATTTGTATGTGAAATGCACAAATTTAGGTTATGCAAGAAGGGTGTTTGATGTTTTGTCTGAGAGAAGTATAATTTCATGGACTGCTATTATTGCAGCATATATCAATTTCAATGATTTAGATGAAGGTTTGCGATTGTTTGCCGAGATTCCGCAGATGGGTATGTTCCCAAATGAGGTTACAATCCTTAGTTTGGTCCAAGGAAGTGGCAATGAAAGGTCTCTGAAACTTGGCAAGTGGTTACATGCTTTCACTCTAAGAAATGGATTTACTATTTCCTTAGTTCTGGCCACTGCTTTTGTTGACATGTATGGAAAATGCGGCGATGCTTGGAGCGCAAGATCCGTTTTCGATAGCGTCGAGAACAAAGATTTAATGATATGGAGTGCGATGATTTCGGCTTATGCACAAGCAAATTGTGCAGATGAGGCTTTTGATGTGTTTGTTCAGATGACTGAATTCGGAATTAAGCCAAATGAGGTAACTATGGTTAGCATCCTTGTGTTATGTGCAAAAATTGGATCCCTTGAAATGGGAAAGTGGATCCATTCGTACATAGACAAGCAAGGAATCAAAGAGGATATGATTCTGAGAACATCTCTGATTGACATGTATGCAAAGTGTGGAGACATAGACACAGCTCAAAGACTTTTTGCTGCGGCCACCGACCGAGACATCTCAATGTGGAATGCAATGATTTCCGGTTTCGCAGTCCACGGTCGTGGTGAGGAAGCATTAAAACTCTTCGCCGAAATGGAAGCAATAGGGGTTACCCCTAATGAAATCACATTCATTGGAGCTCTTCATGCTTGTAGCCATGCAGGATTATTGCAAGAAGGGAATAGGCTTTTCCACAGAATGGTTCATGAGTTTGGTTTGTCACCAAAGGTTGAGCACTATGGTTGTATGGTGGACCTTGTTGGGCGAGCCGGATTGCTCGACGAAGCTCAGGAGCTAATCAAGGGCATGCCAATGAGGCCAAATGTGGCTGTCTTAGGGTCTTTTCTTGCATCATGCAAGCTTCATAAGAATGTGGACCTTGGTGAATGGGCTGCAAAACAGTTTCTCTCATTGGAACCTCAAAAAAGTGGATACAATGTTCTAATGTCAAACATGTATGCTTCAACAAATAGATGGGAAGAAGTTGCTGATATAAGGAGAGCCATGAAGGATGCAGGGATTAGTAAAGAACCAGGTGTTAGCTCCATTGAACTTAATGGCTCACATCCTGGACTTAAGCACGGCCCTAATGGGACAACTTTCATATCATCTGGGATTCCCGATCTCGACAAGATTTTAGGTGGTGGTTTTGCTCTGGGTAGCCTTGTCATGGTTATGGAAGATGCAGAAGCACCTCATCATATGCTTTTACTGAGAAATTTTATGTCTCAAGGACTTGTACACAAACAGCCACTCTTGTATGCTAGTCCATCAAGAGATCCTAAAGGATTTCTTGGTACTTTGCCTAGTCCGGGGTCATCGAAAGAGGAGAAATCTCGAGATCCTAGCCATGAGAAGGATCTGAGAATTGCTTGGCAGTACAAGAAGTACTTTGGTGAGCCTCAACTAAATATCAACTCCAGTAATGGTGGCCATCAGGATTACAGCAATGATCTTGACTTGCGTAAGCCCTTGGAAAGACATTTTTTCAGCGGCAATAATGTCGATTGTGTTAGCATCCTAGATTACCCAAACCTTGATGCTCTTCAAGATCGTTGTGCTGGATTTCTAGCTCAGTTCTCAAGAAATGCAGCCAATGCAGGCAGCCTTTCCTCTGCTGGTCGTATTGCAATTCAATCATTCTGTTCTCCACAATGCCAATATTCAAACATGGAGTGGCATATGCTTTCCTTTATTCGGTCTCTAAAAGGCATGACCCGGTCTTCAAACGCTGTTGCTGTCGTAACCTTTCCACCTTCTCTTCTTTCTCCATCGTGTTCAAAAAGACTGCAACATATGGCAGACACTTTGCTTTCTGTCAAAGCAATTCCAGATGAGGACAAGGAACTAGCAAAACTCCTCACCGGTTACCAGGACATGGTTGGGCTTCTAAATGTACATAAAGTTGCACGGTTAAATACGCAGGTTCCTGTGATTCTTGAGGCCACAACATTCTCAATAAAATTGCAAAAACGAAGGTTTTTGGTTTTAGAATGTCTAAATCAAGCTCCAGTGGATGGTTCAAGTGGGAGTTCTTATGACACTTCTGGTGGCTGTTCTGGCTCAAGTAAATCTTCTGGGCCTCTTGATTTTTAG 3036 0.413 MFIYNSNLSIQKFQSSYPNLNSSTQISPKQDNVPTMKHELHTNLKETQQIHCNFIKTSCCSNNSSYKLHFPALESYSSNAALYSFLISSYIKNNCPESAAKIYVHMRQKGAEIDNFIIPSVLKACCLVNSALLGQEVHGFAVKSGFHRDVFVCNALMAMYNEIVNVSLSRLFFDKIERRDSVSWSTMIRNYSRNGMLVEAMDLLREMYVLEVKPSETAIISILHVIAELGDLKLGKVMHAYAMRNMNYGKFGVSLSTALIDLYVKCTNLGYARRVFDVLSERSIISWTAIIAAYINFNDLDEGLRLFAEIPQMGMFPNEVTILSLVQGSGNERSLKLGKWLHAFTLRNGFTISLVLATAFVDMYGKCGDAWSARSVFDSVENKDLMIWSAMISAYAQANCADEAFDVFVQMTEFGIKPNEVTMVSILVLCAKIGSLEMGKWIHSYIDKQGIKEDMILRTSLIDMYAKCGDIDTAQRLFAAATDRDISMWNAMISGFAVHGRGEEALKLFAEMEAIGVTPNEITFIGALHACSHAGLLQEGNRLFHRMVHEFGLSPKVEHYGCMVDLVGRAGLLDEAQELIKGMPMRPNVAVLGSFLASCKLHKNVDLGEWAAKQFLSLEPQKSGYNVLMSNMYASTNRWEEVADIRRAMKDAGISKEPGVSSIELNGSHPGLKHGPNGTTFISSGIPDLDKILGGGFALGSLVMVMEDAEAPHHMLLLRNFMSQGLVHKQPLLYASPSRDPKGFLGTLPSPGSSKEEKSRDPSHEKDLRIAWQYKKYFGEPQLNINSSNGGHQDYSNDLDLRKPLERHFFSGNNVDCVSILDYPNLDALQDRCAGFLAQFSRNAANAGSLSSAGRIAIQSFCSPQCQYSNMEWHMLSFIRSLKGMTRSSNAVAVVTFPPSLLSPSCSKRLQHMADTLLSVKAIPDEDKELAKLLTGYQDMVGLLNVHKVARLNTQVPVILEATTFSIKLQKRRFLVLECLNQAPVDGSSGSSYDTSGGCSGSSKSSGPLDF* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0462 1011 Gene3D - 667 986 IPR027417 -
Aev09g0462 1011 Pfam PAXNEB protein 668 1010 IPR008728 GO:0002098|GO:0033588
Aev09g0462 1011 Gene3D Tetratricopeptide repeat domain 232 335 IPR011990 GO:0005515
Aev09g0462 1011 Gene3D Tetratricopeptide repeat domain 438 540 IPR011990 GO:0005515
Aev09g0462 1011 Gene3D Tetratricopeptide repeat domain 336 437 IPR011990 GO:0005515
Aev09g0462 1011 Gene3D Tetratricopeptide repeat domain 24 161 IPR011990 GO:0005515
Aev09g0462 1011 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 180 214 IPR002885 -
Aev09g0462 1011 MobiDBLite consensus disorder prediction 738 765 - -
Aev09g0462 1011 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 79 113 IPR002885 -
Aev09g0462 1011 Pfam E motif 602 664 IPR046848 -
Aev09g0462 1011 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 283 317 IPR002885 -
Aev09g0462 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 680 922 IPR027417 -
Aev09g0462 1011 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 485 519 IPR002885 -
Aev09g0462 1011 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 384 418 IPR002885 -
Aev09g0462 1011 Pfam PPR repeat 285 314 IPR002885 -
Aev09g0462 1011 Pfam PPR repeat 83 110 IPR002885 -
Aev09g0462 1011 Pfam PPR repeat 182 207 IPR002885 -
Aev09g0462 1011 Pfam PPR repeat 459 478 IPR002885 -
Aev09g0462 1011 Pfam PPR repeat 559 584 IPR002885 -
Aev09g0462 1011 Gene3D Tetratricopeptide repeat domain 548 666 IPR011990 GO:0005515
Aev09g0462 1011 MobiDBLite consensus disorder prediction 986 1011 - -
Aev09g0462 1011 Pfam PPR repeat family 384 427 IPR002885 -
Aev09g0462 1011 Pfam PPR repeat family 485 531 IPR002885 -
Aev09g0462 1011 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 272 668 - -
Aev09g0462 1011 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 26 428 - -
Aev09g0462 1011 TIGRFAM PPR: pentatricopeptide repeat domain 182 215 IPR002885 -
Aev09g0462 1011 TIGRFAM PPR: pentatricopeptide repeat domain 488 520 IPR002885 -
Aev09g0462 1011 TIGRFAM PPR: pentatricopeptide repeat domain 387 420 IPR002885 -
Aev09g0462 1011 PANTHER PENTATRICOPEPTIDE REPEAT PROTEIN-RELATED 272 668 - -
Aev09g0462 1011 PANTHER PENTATRICOPEPTIDE REPEAT PROTEIN-RELATED 26 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0462 Aev-Chr9 4076035 4082902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0462 83 665 Glycoside Hydrolase AT3G49170 33.333 2.66e-102 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0462 - - gmx:100782031 970.689