Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0460 ATGGAGGCTCTAAAACTGTGGAATCTAACATGTCACCCACTGAAGCACATGTTATTTCACTCCACTTCTTCCATTTCCTCTTACGCATTTCGTCGAACACCTCGCAGGCTCGTTCTTCGCTCCTGTTCTTCTTCCTCAACTGCTGCCTCTGCCCCCGATGTCGACAAATCCGCCTCCAGGGCCGCCGGTCGCAACCGCCGTGCTCCGGCGTCTACGACTTCGACTTCTGACAGGGAGGCCGTTCGAGCCATTCGCCTGAAGAAGGTTGAAGAACTTCGAAGTAAGGGGCTTGATCCATATGCTTATGGATGGGACAAAACTCATAGTGCTAATCAGCTGCAAGATATATATAAAGATTTAGGAAATGGCAAGGAAACAAGCAGTGAAAATGATCAAGTATCCGTTGCTGGAAGAATTGTTGCTAGGAGGGCATTTGGAAAGCTTGCCTTTTTGACACTAAGAGATGATTCGGGGACGATTCAGCTCTATTGTGATAAAGAGAGACTCATAGGTGATCAGTTTGAGCAGTTGAAAGCACATGTTGATATCGGTGATATACTAGGTGCAAGAGGTTCAATAAAACGTACGGAGAAAGGAGAACTTTCTGTGTGTGTTCTTTCTTTTGCAATCCTTACAAAATCTCTGCTTCCACTGCCTGACAAATATCATGGTCTAACTGATATAGATAAACGCTATCGCCAGAGGTATGTAGATATGATTGCAAATCCAGAGGTAGCAGATGTATTCCGTAAAAGAGCAAAGGTTGTCTCAGAGATAAGGCGGACAATGGATTCTTTAGGTTTTGTTGAAGTTGAAACTCCAGTGTTGCAGGGAGCAGCTGGGGGAGCAGAAGCCAGACCATTTATTACATACCACAATTCTCTTGGAAGGGACTTATATCTGAGAATTGCAACTGAACTGCATCTAAAGAGAATGCTGGTGGGTGGATTTGAAAAGGTATATGAGATTGGGCGAATATTTAGAAATGAAGGAATTTCAACCCGTCATAATCCTGAATTTACAACTATAGAGATGTATGAAGCATACTCAGACTACCAAAGCATGATGAATTTGGCAGAGGAGATTGTTACTCAATGTGCTCTAGCAGTTCATGGGAAGCTTACCCTTGATTATCAGGGAGTTGAGATATGCCTTGAGAGGCCTTGGAGGAGGGAGACCATGCACAACCTTGTTAAAGAAATTTCTGGGATTGATTTTAGTGAATTTGGAGATGATCTTGAAGTTGCCAAGCAAGCTACTTTGAGCACCCTTGGAAACAATCTTGAAATCAAGGATAAAGCTTCAATTGAAGCATGCCAATCTGTTGGCAACCTACTTAATGAGGTCTTTGAGATTTTTGTAGAACCAAAGCTCATCCAACCTACATTTGTTTTAGACTATCCAATTGAAATATCTCCACTGGCTAAACCACACAGAAGATCTGCAGGTTTGACCGAGAGATTTGAACTATTCATTTGTGGTCGTGAATTAGGCAATGCATTCTCTGAATTGACTGATCCCATAGATCAGAGAGGTCGCTTAGAGGAACAAATTAGACAGCATGAAAAGAAGAAGGCGAGAGCAGAAGCTGCTTCGACAAATGGTGATACGAAGAAAAGAATAGAAGATGAGGATGACTCATACGAAGTGACTCTTGATGATGACTTTCTAACAGCTCTTGAATATGGGATGCCTCCAGCTTCTGGAATGGGACTTGGAATCGATAGGCTTGTGATGCTTTTGACAAATTCTCCCAGCATTCGAGATGTAATAGCCTTCCCAGTTCTGAAGCCAAATCAAATCGAAGAGATTAAAATTGAGCGGAAAGAAACGACAATCGAGGGACGGATATACCAGAGAGCTTGGAATAGTCGAACCCAGTGCCGGCGCCGGCGACACCCTGAGTTGGCTGCGAAGACAGTGACGACAAAAACGACGAGAAGGGACCAACAAAGTGGAGCAACAGGATTCAAGGAAATGGCATCACAAGTGGTTTCAAACATCAATGGTCCAAGGAAAGCTAGGGCTGGAGGAAGAAAGCCACTTGGTGATCTAACAAACTTGAGCAAACCCAAGAACCTCTCTGTTCTTGAAAGGAAATCACAGACCAGTAACAGGAAAGCACTTCCTGAGATGAAGGGTAAAAACAGCTTGAAGCCAAGCCGTGTGAGAGATCTCACTCTTGATGAGATTGCTGAAGAAATGTGCTTTCATGATCATCAAAAGTGTGTCAAATCACAGTCCATTGAGATGGATCAATTTTTCAAGGCTCTTGAGAATGAGTTGATGAATGATGGCCTTACAATTTACTCTCCAACAAAAAAATTGAAGTCTGAGATTGAGACTGCACACTGGGAATTGGAGGAGTTAACGGAGGAGTTGCCTGCAATTCGCTCATCATTTCGGCCATGCACTCCAGCATCAAGCTCCTCATCATTGTGGGATTCGCCCTCAAGGTTCTCTCTGGTGTTGGATTTGGAGGATCTGAAGTTGATAGATTCACCAATATAG 2511 0.4349 MEALKLWNLTCHPLKHMLFHSTSSISSYAFRRTPRRLVLRSCSSSSTAASAPDVDKSASRAAGRNRRAPASTTSTSDREAVRAIRLKKVEELRSKGLDPYAYGWDKTHSANQLQDIYKDLGNGKETSSENDQVSVAGRIVARRAFGKLAFLTLRDDSGTIQLYCDKERLIGDQFEQLKAHVDIGDILGARGSIKRTEKGELSVCVLSFAILTKSLLPLPDKYHGLTDIDKRYRQRYVDMIANPEVADVFRKRAKVVSEIRRTMDSLGFVEVETPVLQGAAGGAEARPFITYHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYQSMMNLAEEIVTQCALAVHGKLTLDYQGVEICLERPWRRETMHNLVKEISGIDFSEFGDDLEVAKQATLSTLGNNLEIKDKASIEACQSVGNLLNEVFEIFVEPKLIQPTFVLDYPIEISPLAKPHRRSAGLTERFELFICGRELGNAFSELTDPIDQRGRLEEQIRQHEKKKARAEAASTNGDTKKRIEDEDDSYEVTLDDDFLTALEYGMPPASGMGLGIDRLVMLLTNSPSIRDVIAFPVLKPNQIEEIKIERKETTIEGRIYQRAWNSRTQCRRRRHPELAAKTVTTKTTRRDQQSGATGFKEMASQVVSNINGPRKARAGGRKPLGDLTNLSKPKNLSVLERKSQTSNRKALPEMKGKNSLKPSRVRDLTLDEIAEEMCFHDHQKCVKSQSIEMDQFFKALENELMNDGLTIYSPTKKLKSEIETAHWELEELTEELPAIRSSFRPCTPASSSSSLWDSPSRFSLVLDLEDLKLIDSPI* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0460 836 PANTHER LYSINE--TRNA LIGASE 59 601 - -
Aev09g0460 836 TIGRFAM lysS_bact: lysine--tRNA ligase 83 599 IPR002313 GO:0004824|GO:0005524|GO:0006430
Aev09g0460 836 SUPERFAMILY Nucleic acid-binding proteins 79 220 IPR012340 -
Aev09g0460 836 Coils Coil 773 793 - -
Aev09g0460 836 CDD LysRS_N 132 239 IPR044136 GO:0000166
Aev09g0460 836 MobiDBLite consensus disorder prediction 670 720 - -
Aev09g0460 836 Pfam tRNA synthetases class II (D, K and N) 229 596 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Aev09g0460 836 Pfam OB-fold nucleic acid binding domain 133 207 IPR004365 GO:0003676
Aev09g0460 836 Gene3D Bira Bifunctional Protein; Domain 2 223 617 IPR045864 -
Aev09g0460 836 MobiDBLite consensus disorder prediction 522 541 - -
Aev09g0460 836 SUPERFAMILY Class II aaRS and biotin synthetases 227 597 IPR045864 -
Aev09g0460 836 CDD LysRS_core 242 598 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Aev09g0460 836 Coils Coil 511 534 - -
Aev09g0460 836 Hamap Lysine--tRNA ligase [lysS]. 84 602 IPR002313 GO:0004824|GO:0005524|GO:0006430
Aev09g0460 836 Gene3D - 78 219 IPR012340 -
Aev09g0460 836 PANTHER LYSYL-TRNA SYNTHETASE 59 601 - -
Aev09g0460 836 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 249 598 IPR006195 -
Aev09g0460 836 MobiDBLite consensus disorder prediction 47 79 - -
Aev09g0460 836 MobiDBLite consensus disorder prediction 688 710 - -
Aev09g0460 836 PRINTS Lysyl-tRNA synthetase signature 327 344 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Aev09g0460 836 PRINTS Lysyl-tRNA synthetase signature 280 296 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Aev09g0460 836 PRINTS Lysyl-tRNA synthetase signature 264 274 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Aev09g0460 836 PRINTS Lysyl-tRNA synthetase signature 309 322 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Aev09g0460 836 PRINTS Lysyl-tRNA synthetase signature 460 476 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0460 Aev-Chr9 4052788 4065680 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0460 K04567 - gmx:100787720 992.26