Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev09g0445 | ATGGCCACCCTGGCCTCGTTACCCCTCGTAATCTCATTCCTCCGGCCCCACGCCTCCCTCCTCCGCCGCCCACCACCCGCCTCCCGCCGCCACTTCGCCTTTCTCCTCCGCCGTTCCCACCGCCGTCAATTCGCCTCTCTCCCCGTCGTATCCGCCACCGCCACTCCTCCTTCTTCTTCCGTCTCCCCACACTCTTCTTCTTCTTCTTCTTATCCTAATAGCCTCCCACACAAAGCTTCTACCCTCACATTCCAACAAGCCATTCAGCGTCTTCAGGAATATTGGGCTTCGGTTGGATGCTCTATTATGCAATGCAGCAACACAGAGGTTGGAGCTGGGACTATGAACCCTCTAACATATTTAAGGGTACTTGGTCCAGAACCATGGAATGTTGCATACGCAGAACCAAGCATTCGCCCTGATGATAGTCGATATGGAGAAAACCCAAATAGGCTCCAAAGACACACTCAATTTCAGGTCATATTGAAGCCTGATCCTGGAAATTCTCAGGACCTTTTCATCAACAGCCTATCAGCTTTAGGTATTGATGTTAATGCACATGATATACGATTTGTGGAGGACAACTGGGAGAGCCCGGTTCTTGGTGCTTGGGGTTTGGGCTGGGAAATCTGGATGGATGGGATGGAGATTACTCAATTCACCTACTTCCAGCAGGCTGGTAGTCTCCAGTTATCACCTGTTTCTGTAGAAATCACATATGGCCTTGAGCGTATCCTCATGTTACTACAGGGAGTTGATCACTTCAAAAAGATCAAATATTCTGATGGAATCACATATGGGGAGCTGTTCTTGGAGAGCGAGAAGGAAATGAGTGCTTATTACTTGGAGCATGCCAGTGTAGATCATGTTCAAAAACATTTTGATTTCTTCGAGGAGGAAGCTCGTCGTTTACTTTCTTCAGGCCTAGCAATCCCTGCGTATGATCAGCTTCTGAAAACATCACATGCTTTTAATATCTTAGATTCCAGAGGCTTTGTTGGGGTAACAGAGCGTGCTCGATATTTTGGTCGCATGCGCAGTTTAGCTCGCCAGTGTGCACAACTTTGGTTAAAGACTAGGGAGATGCTTGGCTTCCCTCTTGGTTTCATCTCTGAACCTGATAACTTTTTATTGCCAAAAGAAGTTCTGGAGGCTGCTCGTGAGAAGGTGCATGATCAGTCAAGAGCATTTGTTCTTGAAATTGGCACTGAAGAGATGCCCCCTCAAGATGCTGTAGATGCGAGCAAGCAACTGAGAGATTTGATCTTTCAATTATTTGAAAGACAGAGGTTAAAGTATGGCGAAGTGCAAGTTTTTGGCACCCCTCGTAGAATAGTGGTTTCCATTGAAAATCTTTCCACAAAACAAACTGAAACAGAGATTGAGGTTCGGGGCCCTCCTGTTTCAAAAGCATTTGATCATGAAGGAAACCCAACAAAGGCCATTGAGGGATTTTCTCGTAGATACTCTGTTCCACTGGACGAGGTATACCGAAAGGTTGATGGGAAAACAGAATATGTATATGCTCGTGTAAAGGAGCCTTCAAGACATGCTTTGGAGGTTTTGTCTGAAGATCTGCCTGCTACTATTGCTAAAATTTCATTTCCAAAGACCATGCGTTGGAATTCTCAGGTGATGTTTAGTAGGCCTATCCGGTGGATTTTGGCATTGCATGGAGATGTAGTGGTTCCATTTGTGTATGCTGGGGTCTTGAGTGGAAACTTATCTCGTGGTCTTCGTAATACTTCTTCAGCCATATTGCAGATAGAAAGTGCAGAGTCTTATTCTGTTGCAATGAAAAATGCAGGAATTAATGTTGTTGTTGAGGATCGTAAGAAAATGATTTTTGAGCAATCTAATGCATTAGCAGAAAGTGTAAATGGCCAACTTGTCGTTCCAAAAGGCTTGCTTGACGAGGTTGTAAATCTTGTTGAGGCACCTATTCCAGTGCTTGGGAAGTTTAAAGAAACCTTCTTGGACCTTCCAAAAGATCTTTTGACCATGGTTATGCAAAAACATCAGAAGTATTTTGCTGTATGTGACAATGATGGACAATTATTGCCTTATTTTATTGCTGTTGCAAATGGATCAATTGATGAGGCTACTGTGAGGAAAGGAAATGAAGCTGTTCTCAGGGCTCGCTATGAAGATGCTAAGTTCTTTTATGAGATTGACACTCGTAAAAGATTTTCTGAATTCCGTGAGCAACTTAAAAATATTCTCTTTCACGAGAAGCTTGGAACCATGTTGGATAAGGTGACTCGTCTTGAAAACATGGTTATTCAGCTTAGTTGTATCCTGGATATCAGTGAAGATAAGCAACAGATTATCCGAGATGCTGTCTCACTTGCTATGTCTGATCTTGCCACTTCAGTTGTCACTGAGTTTACCTCTCTGTCGGGAATAATGGGGCGTCACTATGCCCTTAGAGATGGATACTCGGACCAGATAGCAGATGCCTTGCTTGAGATAACTCTTCCTAGATTTTCTGGGGACATACCACCCAAAAGTGATGCTGGCATAGTTCTGGCAATTGCTGATAGATTAGATAGCTTGGTAGGTTTATTTACTGCTGGCTGTCAACCTAGTTCCACAAATGATCCATTTGGTCTGAGAAGAATCTCATATGGTCTTGTGCAATTGTTGGTAGAAAAGAATAAAAACCTTAATTTTAAAGAGGCTCTGAAACTTGCCGCGGATGTGCAGCCCATTAAAGTGGAACCTCATGTAATAGATGATGTACATCAATTTGTTACTCGAAGATTAGAGCAATTTCTGGTTGACAAGGGAGTGAATGCAGAGTTTGTTCGTTCCGTCCTTGCCGAGAGGGCAGATTTTCCCTGTCTTGCAGCAAAGACAGCATATAGAATGGAAGAATTATCAAGAGACAAGCTTTTCCCTAAAGTAGTTGAAGCATACTCGAGACCAACAAGAATTGTTCGTGGAAAGGAAGATGAACTACATTTGAAGGTGGATGAATCTGCTTTTGAGACAAATGAAGAGAGAGCTTTATGGAGCACATTTTTGTCAGTTAAAAAGAGCATTAACCCTGGTCTTGACATCGATGATTTTGTTGAAATTTCATCTCAGCTAATACAGCCGCTTGAAGATTTCTTCAATAATGTCTTTGTGATGGTGGATGATGATAAAATCAGAAAAAACAGGCTGACTATGCTCAAAGAAATCTCTGAACTCCCTAGAGGAATTGCAGACCTCACAGTTCTACCAGGATTTTAA | 3237 | 0.4313 | MATLASLPLVISFLRPHASLLRRPPPASRRHFAFLLRRSHRRQFASLPVVSATATPPSSSVSPHSSSSSSYPNSLPHKASTLTFQQAIQRLQEYWASVGCSIMQCSNTEVGAGTMNPLTYLRVLGPEPWNVAYAEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFINSLSALGIDVNAHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLSPVSVEITYGLERILMLLQGVDHFKKIKYSDGITYGELFLESEKEMSAYYLEHASVDHVQKHFDFFEEEARRLLSSGLAIPAYDQLLKTSHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWLKTREMLGFPLGFISEPDNFLLPKEVLEAAREKVHDQSRAFVLEIGTEEMPPQDAVDASKQLRDLIFQLFERQRLKYGEVQVFGTPRRIVVSIENLSTKQTETEIEVRGPPVSKAFDHEGNPTKAIEGFSRRYSVPLDEVYRKVDGKTEYVYARVKEPSRHALEVLSEDLPATIAKISFPKTMRWNSQVMFSRPIRWILALHGDVVVPFVYAGVLSGNLSRGLRNTSSAILQIESAESYSVAMKNAGINVVVEDRKKMIFEQSNALAESVNGQLVVPKGLLDEVVNLVEAPIPVLGKFKETFLDLPKDLLTMVMQKHQKYFAVCDNDGQLLPYFIAVANGSIDEATVRKGNEAVLRARYEDAKFFYEIDTRKRFSEFREQLKNILFHEKLGTMLDKVTRLENMVIQLSCILDISEDKQQIIRDAVSLAMSDLATSVVTEFTSLSGIMGRHYALRDGYSDQIADALLEITLPRFSGDIPPKSDAGIVLAIADRLDSLVGLFTAGCQPSSTNDPFGLRRISYGLVQLLVEKNKNLNFKEALKLAADVQPIKVEPHVIDDVHQFVTRRLEQFLVDKGVNAEFVRSVLAERADFPCLAAKTAYRMEELSRDKLFPKVVEAYSRPTRIVRGKEDELHLKVDESAFETNEERALWSTFLSVKKSINPGLDIDDFVEISSQLIQPLEDFFNNVFVMVDDDKIRKNRLTMLKEISELPRGIADLTVLPGF* | 1079 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev09g0445 | 1078 | ProSiteProfiles | Heterodimeric glycyl-transfer RNA synthetases family profile. | 748 | 1040 | IPR006194 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Aev09g0445 | 1078 | Pfam | Glycyl-tRNA synthetase beta subunit | 397 | 941 | IPR015944 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Aev09g0445 | 1078 | TIGRFAM | glyQ: glycine--tRNA ligase, alpha subunit | 83 | 367 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Aev09g0445 | 1078 | Gene3D | Bira Bifunctional Protein; Domain 2 | 71 | 285 | IPR045864 | - | |
| Aev09g0445 | 1078 | Gene3D | Class II aaRS and biotin synthetases; domain 2 | 286 | 365 | - | - | |
| Aev09g0445 | 1078 | TIGRFAM | glyS: glycine--tRNA ligase, beta subunit | 395 | 1075 | IPR015944 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Aev09g0445 | 1078 | MobiDBLite | consensus disorder prediction | 52 | 76 | - | - | |
| Aev09g0445 | 1078 | CDD | GlyRS_alpha_core | 83 | 361 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Aev09g0445 | 1078 | Pfam | Glycyl-tRNA synthetase alpha subunit | 84 | 361 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Aev09g0445 | 1078 | SUPERFAMILY | HD-domain/PDEase-like | 730 | 877 | - | - | |
| Aev09g0445 | 1078 | Hamap | Glycine--tRNA ligase beta subunit [glyS]. | 394 | 1075 | IPR015944 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Aev09g0445 | 1078 | SUPERFAMILY | Class II aaRS and biotin synthetases | 83 | 361 | IPR045864 | - | |
| Aev09g0445 | 1078 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 136 | 151 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Aev09g0445 | 1078 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 188 | 212 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Aev09g0445 | 1078 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 322 | 338 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Aev09g0445 | 1078 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 214 | 234 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Aev09g0445 | 1078 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 237 | 252 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Aev09g0445 | 1078 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 157 | 177 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Aev09g0445 | 1078 | Hamap | Glycine--tRNA ligase alpha subunit [glyQ]. | 82 | 362 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Aev09g0445 | 1078 | PANTHER | GLYCYL-TRNA SYNTHETASE | 393 | 1078 | IPR015944 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Aev09g0445 | 1078 | ProSiteProfiles | Heterodimeric glycyl-transfer RNA synthetases family profile. | 83 | 357 | IPR006194 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev09g0445 | K14164 | - | gmx:100787365 | 1794.63 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aev09g0445 | 09 | 3885817 | 3903987 | Aev09g0445 | 09 | 3885817 | 3903987 | ECH |