Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0418 ATGAAGAGTGGAGGGAAGAGGAAGTTCTCATCAATCTCTGATGATCCACCGAACAATCCTGTTCCTGTTCCTGTTCCTGCAACTGCTCTCGTTGTTGTTGATTCAAACGGCGACAATGGCTCTGACGTTGTTGTTGCTGATGCAGAGCCTCTTGTTGTTGCTCCTCCTTTGCAAAACAGAGTGGAAGCAGAAGAGCAGAACCTTGTAGAGGATTCTGAACTAGATTCTGAAGATGGTGAGGAAGAAGAAGAAGAAGACATGGAAGCTGGTTCTGATGCTGTTCCTCCTACTGAGAAGGAACAAGGTTTCACACTCGATGATGATTACTACGAAGTTGAAGCAATTCTTCGTAAGAAGTACGTCAAGGGTAAGGCCTTCTACTTTATCAAATGGCATGGATGGTCTGATTCAGACAACACTTGGGAGCCTTTGGAAAATTTGCATCGTGTTAGAGATATTGTTGCGGCTTTTGAGGAGAGGTGGAACGCAGCAAAGCAGCGTAAGGGCAAGCGCAAGAGCATGGGTAGTCTCTCGAGCGTGAAGAAGAGGGTGGAGCGTTCGGTCACTCCTTACAGTCTCAGACGTTTGCAGGCTACTACGGCCAACAACCATGCACCGCCTGCTCCTCCTATCACTGATCTTCATTATGCGGATATTCCTGCATTTCCTCAACCTGTGATTTTTGCTGATGAAGTAGAAAATGATGCTGAGGTTAGCAATGCGAAGAGACGCAAAAGGGTTGCAAATGAAGAACCTGAATATGATCCAACGCTTATTGAGCTTAGGGCATTGACAAACAATGGACATGATGCAGACAAGCACGTGATACAGCTCCAAGAAAATAATCCTGCATCGGGTGATGGTCACGTGGATGGCCAATCAAACGGGGCTAGCCAGGAATCAGATCAAAGTGACCGCTGCAGAGGATCCAAGAAACGAAAATCTGGTTCTGTGAAGAGGTTCAAAAAAGATTTGTATCTTGGTGACTCTTCTAATTTACAAAATCCAAATGGCAGATGTGATGCTGCAGAGGAATCCAGAAGAAGAGGACCTGCTGATACCGTGGATAAGACTAGTAAGAAGGAGGATCATGCCAAACTTCCCAGCATAATCAGGATTGTAAGGCATCTTAACTGTTCACCGGCAGTACCTACCGGCAGCGAAGAGGACCGTTTTGTGACCTTTATAGCCAAGAGGTCTGATGGATTAGAGGTTATGGTCGATAACCAATTTCTCAAGGATAACTATCCGGATATGCTGATCGATTTCTATGAGATGCATCTACGACACTCTCCAACATACTGA 1305 0.4559 MKSGGKRKFSSISDDPPNNPVPVPVPATALVVVDSNGDNGSDVVVADAEPLVVAPPLQNRVEAEEQNLVEDSELDSEDGEEEEEEDMEAGSDAVPPTEKEQGFTLDDDYYEVEAILRKKYVKGKAFYFIKWHGWSDSDNTWEPLENLHRVRDIVAAFEERWNAAKQRKGKRKSMGSLSSVKKRVERSVTPYSLRRLQATTANNHAPPAPPITDLHYADIPAFPQPVIFADEVENDAEVSNAKRRKRVANEEPEYDPTLIELRALTNNGHDADKHVIQLQENNPASGDGHVDGQSNGASQESDQSDRCRGSKKRKSGSVKRFKKDLYLGDSSNLQNPNGRCDAAEESRRRGPADTVDKTSKKEDHAKLPSIIRIVRHLNCSPAVPTGSEEDRFVTFIAKRSDGLEVMVDNQFLKDNYPDMLIDFYEMHLRHSPTY* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0418 434 MobiDBLite consensus disorder prediction 1 25 - -
Aev09g0418 434 CDD CD_CSD 110 159 - -
Aev09g0418 434 SUPERFAMILY Chromo domain-like 95 164 IPR016197 -
Aev09g0418 434 ProSiteProfiles Chromo and chromo shadow domain profile. 110 169 IPR000953 -
Aev09g0418 434 SMART chromo_7 109 162 IPR000953 -
Aev09g0418 434 SMART ChS_2 362 432 IPR008251 GO:0005634
Aev09g0418 434 MobiDBLite consensus disorder prediction 281 363 - -
Aev09g0418 434 Pfam Chromo (CHRromatin Organisation MOdifier) domain 110 160 IPR023780 -
Aev09g0418 434 MobiDBLite consensus disorder prediction 281 303 - -
Aev09g0418 434 MobiDBLite consensus disorder prediction 341 363 - -
Aev09g0418 434 Gene3D - 105 176 - -
Aev09g0418 434 MobiDBLite consensus disorder prediction 68 91 - -
Aev09g0418 434 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 61 433 IPR044251 GO:0006325|GO:0031507
Aev09g0418 434 MobiDBLite consensus disorder prediction 52 104 - -
Aev09g0418 434 ProSitePatterns Chromo domain signature. 127 147 IPR023779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0418 Aev-Chr9 3590778 3593930 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0418 - - ahf:112732281 341.658