Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0296 ATGGGGAGTTCTGAAGGAATGGAAACATCGTCGAAGCAATACGGTGTGACGAAGCCAATATCAATGGCTGGACCAATGGCTACTGATTTGCAAAGGACCAAGGAATTAGAAAAGGTTCTTGTTGATTCTGGTCTTTACGAGACAAAGGAGGAAGCTGCCAAGAGAGAGGAGGTCCTTCTCAGACTTCGACAGGTATTAAGAGGTTGGGTGAAGATGCTTACCCGCATACGAGGATACACTGATCAAATGGTGGAAGATGCAAATGCTGTCGTGTTCACTTTTGGTTCTTACCGACTTGGTGTTCATGGTCCTGGGGCTGACTTAGACACTTTATGTGTTGGGCCATCTTACGTGAACCGGGAGGAGGATTTTTTCTTCACATTGCATGACATCCTTGCTAACATGGAGGAAATTACAGAACTACAACCAGTTCCAGATGCACATGTACCAGTTATGAAGTTCAAGTTTGATGGAATATCGATTGATCTACTGTATGCAAGTATTTCTTGCCTAATTGTACCTGAAGACTTGGATATATCTGATGTCTCTATCCTATACAATGTTGATGAGCCTACTGTTCGAAGTTTAAATGGCTGTAGGGTTGCAGATCAAATTCTAAAGCTTGTTCCAAATATTGAGCACTTTCGAACGACACTTCGGTGCTTAAAGTTTTGGGCCAAAAGGCGAGGTGTTTATTCCAATGTTACGGGTTTTCTTGGTGGTGTTAACTTGGCACTTCTTGTAGCCCGATTGTGTCAGTTGTATCCAAATGCAGACCCAAGCATGCTTGTCTCTCGATTCTTCAGGGTGTATACACAGTGGAGGTGGCCGAATCCTGTCATGCTGTGTCCAATTGAGGAGAATGAGCTTGGGTTTTCTATTTGGGATCCTCGCAAAAATCCTCGTGACCGGACCCATCATATGCCAATCATTACTCCTGCCTATCCTTGTATGAATTCTAGTTACAATGTTTCATCAAGCACACTTCGTGTTATAATGGAGCAATTCCAATTCAGCAACAAGATCTGTGGGGAAATAGAACTGAACAAGGCTCGTTGGACTGCTCTATTTGAGCCATACTCTTTCTTTGAGAGCTATAAAAACTACTTGCAAGTTGACATTGTTGCTGCTGATATTGATGACTTGCGTGCTTGGAAAGGTTGGGTGGAATCTCGTCTTCGGCAGCTGACCTTGATGATTGAACGTGACACTTCTGGGAAGTTGCAGTGTCATCCCTATCCTCACGAGTATATTGATACATCAAGGCAGACTGCACATTGTGCATTCTTCATGGGTTTGCAGAGGAAGCAGGGTGAGATCGTTCAAGAAGGTCAGCAATTTGATATACGTGGGACTGTTGAAGAGTTTCGACATTCTGTTCATATGTACATGTTCTGGAGACCTGGAATGGACATGCATGTTTCTCATGTTCGCAAAAGGCAAATTCCATCCTACGTGTTTCCTGATGGTCATAATAATAAACGATCTCGATCATTGAGGCCAGCAGGTCAACTGGAGAATCCTCATAAACCACCTCCTGTAGATGATGTCAATGGGTCTGGACATGGTCAGAGAGTCCAGAAGAGGAAGTATGAGGAAGTGGTTGGTGAGAAACAGGATGTTGTACTGAAAAAACAATCCAGCCCTCATGTGGATACCTTGGCTAGAAGCAAGGTGTGCCTAGATTCTGGTGATTTTTCTGGATCTGATACTCAAGATTTGGGAAATGTGGAGAGCATGAATTTGTGTAACAGTGGGCAAGATATGTTGGATAGAACAGAGTCTCCTGATCTTGAATGCGCGTCAAATTGTAGTGTGGTTACATCTGTTGCAAGTGATGGTGGTTCTTGTGAAGATGTTGGCTCTGCATCAGCGACAGTTTGTGCTGAAGATAACACCAGGAATGTTGAGGGGATGACCAGTGGCAGGTTTGAGGATGCTACTTGCACGACAGATTCTGTCAAGAGTTTGGAAAATGGAGCATCAAGAGGAAATGAACTATTACAAGATCAGCTACAAGAACAATTGGAGCCTAATCCAATGCCAGGTACGGTTCTTAATTCCAAGGGAAGAGTTGGCTCAGAAGTTGCTGTGCAAAAATCACTGATCAGGAGACACAGCCTAGCATCTACAGCATGA 2139 0.4376 MGSSEGMETSSKQYGVTKPISMAGPMATDLQRTKELEKVLVDSGLYETKEEAAKREEVLLRLRQVLRGWVKMLTRIRGYTDQMVEDANAVVFTFGSYRLGVHGPGADLDTLCVGPSYVNREEDFFFTLHDILANMEEITELQPVPDAHVPVMKFKFDGISIDLLYASISCLIVPEDLDISDVSILYNVDEPTVRSLNGCRVADQILKLVPNIEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNLALLVARLCQLYPNADPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSIWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSSSTLRVIMEQFQFSNKICGEIELNKARWTALFEPYSFFESYKNYLQVDIVAADIDDLRAWKGWVESRLRQLTLMIERDTSGKLQCHPYPHEYIDTSRQTAHCAFFMGLQRKQGEIVQEGQQFDIRGTVEEFRHSVHMYMFWRPGMDMHVSHVRKRQIPSYVFPDGHNNKRSRSLRPAGQLENPHKPPPVDDVNGSGHGQRVQKRKYEEVVGEKQDVVLKKQSSPHVDTLARSKVCLDSGDFSGSDTQDLGNVESMNLCNSGQDMLDRTESPDLECASNCSVVTSVASDGGSCEDVGSASATVCAEDNTRNVEGMTSGRFEDATCTTDSVKSLENGASRGNELLQDQLQEQLEPNPMPGTVLNSKGRVGSEVAVQKSLIRRHSLASTA* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0296 712 CDD NT_PAP_TUTase 54 209 - -
Aev09g0296 712 Gene3D - 15 357 - -
Aev09g0296 712 Gene3D Poly(A) polymerase predicted RNA binding domain 361 477 - -
Aev09g0296 712 Pfam Poly(A) polymerase predicted RNA binding domain 361 421 IPR007010 GO:0003723|GO:0043631
Aev09g0296 712 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 360 488 IPR011068 GO:0003723|GO:0016779|GO:0031123
Aev09g0296 712 MobiDBLite consensus disorder prediction 485 531 - -
Aev09g0296 712 Gene3D Beta Polymerase, domain 2 47 203 IPR043519 -
Aev09g0296 712 PANTHER NUCLEAR POLY(A) POLYMERASE 4 2 589 - -
Aev09g0296 712 SUPERFAMILY Nucleotidyltransferase 12 208 IPR043519 -
Aev09g0296 712 SUPERFAMILY PAP/OAS1 substrate-binding domain 210 359 - -
Aev09g0296 712 PANTHER POLY A POLYMERASE 2 589 - -
Aev09g0296 712 Pfam Nucleotidyltransferase domain 85 163 IPR002934 GO:0016779
Aev09g0296 712 Pfam Poly(A) polymerase central domain 15 359 IPR007012 GO:0004652|GO:0043631
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0296 Aev-Chr9 2439481 2443688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0296 K14376 - gmx:100783237 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0296 09 2439481 2443688 Aev09g0296 09 2439481 2443688 ECH