LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev09g0291	ATGGCCTCTTACAGGCCCTTTCCTGCACCACCCCAATCAAGTCAAAACCCTAATAATCAGTATAATCAGAACTGGGGTGGTGTTGGTGGTGGAGACCCTTCAACTTCTTCTTCGTTTCCTCAATCTTATAACCAAATGCCCCCAAATTCAAATTTTCATCACCATCATGGTGGTGGTGCTGCAGCTCCACCACCACCACCTCCCCCTCCTTCACATCACCATTACCCTTATCCGCCACCTCCGCCGCCACCTCCGCCGCCACCTGAAAATTCATACCCTCCGCCGCCACCACCACCTCCACCATCACATGGCGGTCCTATGTATTACCCTTCTAATCAGTACTCTCAGTATGGCCAGCAGCCACCACCGCCACCACCCCCTCCTTCGTCCCTGCCTCCTAGTAATTCTATCCCACCACCGCCCCCTTCGTCGCCGCCTCCCTCTTCAGCTCCTCCTCCGCCGCCCCCATCAAAGGAGGATAGACGGGTGCACCACCGCGATAAGGGGCCGGTAAAGGAAGGTGGTTATGAGCATTCTAATCATGGGGCTCATCATAGACAACATAAGTCTGGTGTTCCTCCGGTTCCAGGGAAGAAACCGAATGGGGCAATGCCGGGTAGAGTTGAGACTGAGGAGGAGAGGAGGTTGAGGAAAAAGAGGGAATTTGAGAAGCAGAGGCAAGAAGAGAAGCATAAGCAGCACCTGAAGGAATCACAGAACAGTGTTCTGCAGAAGACTCAGATGCTGGCATCTGGGAAAGGGCATGGTTCTGTTGTAGGGTCTCGAATGACGGCAGAGAAAAGAACTACTCCCTTGTTGAGTGGGGAGAGGATTGAAAATAGGTTGAAAAAACCTACAACATTTTTGTGCAAGATGAAATTCCGAAATGAACTTCCAGATCCAAGTGCGCAACCTAAGCTTATGGCGTTCAAGAAAGATAAAGATCAATATACAAAATACACAATCACATCATTGGAGAAAATGTACAAACCCAAACTTTTTGTGGAGCCAGATCTTGGAATTCCTCTGGACCTGCTTGACCTCAGTGTATACAATCCTCCTAGTGTCAGACTGCCTCTTGCTCCCGAAGATGAAGATTTATTACGAGATGATGTAGCAGTTACTCCTATAAAAAAGGACGGCATAAAAAGAAAAGAACGGCCTACTGATAAAGGTGTAGCTTGGCTAGTCAAAACACAATACATATCTCCTCTGAGCATGGAATCAACAAAACAGTCTTTAACTGAAAAACAAGCTAAGGAGCTGAGAGAGATGAGGGGAGGCCGCAACATTTTGGATAATCTCAACAGCAGGGAAAGACAAATCAGGGAAATAGAAGCATCATTTGAAGCTGCTAAGTCGCACCCTGTTCATGCAACTAACAAAAATTTGTATCCTGTTGAGGTTATGCCTTTGTTGCCCGACTTTGATAGGTACGAAGATCAGTTTGTTGTTGCAGCATTTGATAATGCTCCCACAGCTGATTCAGAAATGTATACTAAGTTGGACAAATCTGTTCGTGATGCCTATGAATCAAAGGCTATCATGAAAAGTTATGTTGCATCAGGCACAGATCCTGCAAATCCTGAGAAATTTTTGGCTTACATGGCCCCAGCTCCAGGACAACTATCGAAGGATATATATGATGAGAATGAAGAAGTCACATATTCATGGGTTCGCGAGTATCATTGGGATGTTCGGGGTGATGATGCTGATGACCCTGCGACGTTCGTAGTTTCATTTGACGAGTCAGAAGCACGTTATCTGCCTCTTCCAACAAAACTTGTCTTAAGAAAAAAGAGGGCTAAAGAGGGAAGATCAGGTGATGAGGTTGAGCAATTTCCAGCACCGTCTAAAGTAACCGTAAGGCGGAGGTCGAGTGTTGCAGCAATTGAGCGGAAGGAATCCGGGGTTTATACAAGTTCAAAAGCAAGTTCTTCAAAGAGAGGGCGTGTAGAAATGGATGATGATATCGAACACCATCATCGAGCCGCACAGCAGAATGACGGTTATCCATCCAGCGGAGCAGAAGATGACATGTATGATTGA	2049	0.4661	MASYRPFPAPPQSSQNPNNQYNQNWGGVGGGDPSTSSSFPQSYNQMPPNSNFHHHHGGGAAAPPPPPPPPSHHHYPYPPPPPPPPPPPENSYPPPPPPPPPSHGGPMYYPSNQYSQYGQQPPPPPPPPSSLPPSNSIPPPPPSSPPPSSAPPPPPPSKEDRRVHHRDKGPVKEGGYEHSNHGAHHRQHKSGVPPVPGKKPNGAMPGRVETEEERRLRKKREFEKQRQEEKHKQHLKESQNSVLQKTQMLASGKGHGSVVGSRMTAEKRTTPLLSGERIENRLKKPTTFLCKMKFRNELPDPSAQPKLMAFKKDKDQYTKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRLPLAPEDEDLLRDDVAVTPIKKDGIKRKERPTDKGVAWLVKTQYISPLSMESTKQSLTEKQAKELREMRGGRNILDNLNSRERQIREIEASFEAAKSHPVHATNKNLYPVEVMPLLPDFDRYEDQFVVAAFDNAPTADSEMYTKLDKSVRDAYESKAIMKSYVASGTDPANPEKFLAYMAPAPGQLSKDIYDENEEVTYSWVREYHWDVRGDDADDPATFVVSFDESEARYLPLPTKLVLRKKRAKEGRSGDEVEQFPAPSKVTVRRRSSVAAIERKESGVYTSSKASSSKRGRVEMDDDIEHHHRAAQQNDGYPSSGAEDDMYD*	683

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev09g0291	682	MobiDBLite	consensus disorder prediction	14	51	-	-
	Aev09g0291	682	PRINTS	Proline rich extensin signature	117	142	-	-
	Aev09g0291	682	PRINTS	Proline rich extensin signature	3	19	-	-
	Aev09g0291	682	PRINTS	Proline rich extensin signature	83	99	-	-
	Aev09g0291	682	PRINTS	Proline rich extensin signature	61	82	-	-
	Aev09g0291	682	MobiDBLite	consensus disorder prediction	117	156	-	-
	Aev09g0291	682	MobiDBLite	consensus disorder prediction	157	181	-	-
	Aev09g0291	682	MobiDBLite	consensus disorder prediction	205	238	-	-
	Aev09g0291	682	Pfam	Paf1	288	664	IPR007133	GO:0006368\|GO:0016570\|GO:0016593
	Aev09g0291	682	PANTHER	RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG	113	678	IPR007133	GO:0006368\|GO:0016570\|GO:0016593
	Aev09g0291	682	MobiDBLite	consensus disorder prediction	60	106	-	-
	Aev09g0291	682	Coils	Coil	208	228	-	-
	Aev09g0291	682	MobiDBLite	consensus disorder prediction	600	682	-	-
	Aev09g0291	682	MobiDBLite	consensus disorder prediction	648	666	-	-
	Aev09g0291	682	MobiDBLite	consensus disorder prediction	248	267	-	-
	Aev09g0291	682	MobiDBLite	consensus disorder prediction	1	241	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev09g0291	Aev-Chr9	2392679	2400261	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev09g0291	K15174		-	gmx:100800148	814.683

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev09g0291	09	2392679	2400261	Aev09g0291	09	2392679	2400261	ECH