Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0237 ATGGAAGCAAATGAAGCTAAGTTCTCAGCGTTTCCTTTCAAACCGTATTCGATTCAGATGGATTTCATGAACGCATTGTATCAATCTCTTAACCATGGTGGCGTCTCCATGTTAGAAAGCCCTACTGGTACCGGGAAGACTATGAGTGTTATTTGTAGTGCTTTGCAATGGGTGCTTGATCAGAGGAAACAGCAAGAATCACAACATGCGTGTTGTAAGGATCAAGCAAATGGTGATGGTTGTGTTGGTTCAGACGACGAACCTGATTGGATGAGGGACTTTATTGTCAACAAAGACCAACAAGCCAAAGAGGAGAAAGTGAAAAGTAAAAAGGACAAGTTTTCGGGAAAATCTGATAAGAAGAAGAAGGAGGGCAAGGGAATTTGTAAAGATTTTGGGGTTGCGGTTGGTGAAGATTCTCCTGCCGAAAAGGCTAGTCAGAGTTTGCAAAAGAAACTTGATGCAGAAGATGTTGATGATAAGGAGTTTTTACTCGAAGAATATGAGAGTGAAAATGAGGAGGTTGTAGGGAGTAAGACATCTAAGAGGAAGAGTGTTAAAAGTGTTATTAATTCTTCGAGCGAAGATGAGTCTGACAATGGTGATGAAGAGGAGCAAGAGGAGAAGAAGTTTAAGGTTTATTTCTGCAGTCGAACACATTCGCAGCTTTCACAGTTCATAAAGGAGTTACAGAAGACAGTCTTTGCTGATGAAATGAGTGTCGTGAGTTTAGGTTCCCGGAAAAATCTTTGCATTAATGAAGATGTACTTTCACTTGGAAACTCCACACGAATAAATGAGCGATGCTTGGAACTCCAGAAGAAAAAGAAAAAAGAAGCTACAAAAGTTAAGAGCTTAAGAGTAGGTGTAGGTGCACGCAGAACAAAGGCCACTTCCGGTTGTCCAATGCTTAGAAAACATAAACTACAACAAGAATTCAGGAATGAGGTATCTCAACAAGGGCCCTTGGATATTGAAGATCTTGCAAACCTTGGGAGAACTTTGGGGACTTGTCCATATTATGGTTCGAGAAGCATGGTTTTGAGCGCAGAACTTGTTGTCCTTCCATATCAATCTCTTCTGTCAAAATCATCTCGTGAAGCACTTGGTCTGAATTTGAAATCCAATATAGTTATAATAGATGAGGCTCATAATTTAGCTGATTCACTCATCAGCATGTATGACTCCAAAATTACTTTGTCACAGCTGGAGAATGTGCATTGCCATGTTGAGCGGTACTTTGCGAGATTTCGCAATCTTTTGGGACCTGCTAATCGGAGATATATTCAAACTCTGATGGTCCTGACACGAGCTTTCCTCCGAGTACTTCTCAACGAAAAGTCTGAAAATGTCATAGACCCTTGCAGTGATAAAGAGAAGGCTTCCGAAGAAAGTACAACGTCTGATTTTACCATGGCCACCAATGATTTTATCTTTGAACTTAATATAGACAATATCAACTTGCTCAAATTATTGAAGTATATAAAGGAGAGTAATATCATGCACAAGGTTAGTAGTTATGGAGAAAAATTGGCTACCTCAGATAGGAAATCAGCACTCGATAAAATCAGGGAACAAGGAGAGGAGGGAAGCTGTCAATCTGCATTCCAGGCCTTAGCTGACGTATTGCTATCGCTGACAAACAATGATAGCGACGGAAGGATAATAATTTCAAGGTCTAGACCAACTGAGTTAAGAAAACAAGGAGGATATATTAAGTATGTTATGCTCAGTGGAGAGAAGATTTTCTCTGAGATTGTAGATCAAGCACATGCTGTTTTATTAGTAGGAGGAACACTTCAACCTATAGAAGAGACAAGGGAAAGACTCTTTCCATGGTTACCACCAAATCAGTTGCATTTCTTTTCATGCGGCCATATTGTCCCTCCAGATAGCATTATGCCAATTGCAGTTTCCCGCGGCCCTTCTGGCCGCTCCTTCGATTTTAGCTACAACTCTAGGAGCTCACCGGACACGATGCGAGAACTAGGGCTTTTGCTATGTAATTTGGTGACTGTGGTTCCTGAAGGAATTGTAGTGTTCTTCCCTTCTTTTGATTATGAAGGTAAAGTCTACGAAAACTGGGAATCTTCGGGCATTCTTCAAAGGATTACTCGGAAGAAGCGTATCTTTAGAGAGCCTAGAAATAACATGGATGTTGAATCTGTTCTCAAGGAATATAAAGATACCATTTGCACACTGTCAAGTACGAAATCAGAAGCAAACCAATCATCTCATAATGGTGCAGTACTTCTAGCTGTTGTTGGTGGCAAGATATCTGAAGGAATCAACCTAAGTGATGGGATGGGACGGTGCATCGTGATGGTTGGACTTCCATATGCTAGTCCTTCTGACATTGAGTTGTTGGAGAGAATAAAGCATATTGAAGGCTTTCGAAATTCGAAATCACTTGAAAACCGGAGATTTTCGTCCGGTTATGAAGTATATAGAGGAGATGCACAAGGTGGTTTTGACATCTTAAGAAGTTGCAGTCACAGAGGAAAAGAGTACTATGAGAATCTCTGCATGAAAGCTGTAAATCAATCAATAGGTAGAGCAATTCGTCACATTAATGACTATGCAGCAATTTTGTTGGTTGACACAAGGTATGCATCTGATTCTTCAAAAAGAAGCTTTTCCCATCCAATCAACAAGCTCCCACAATGGATCAAAGATCGTCTTGTTTGTTCTACAAAAAACTATGGTGAAGTTCATAGGTTGCTGCATCAGTTTTTCAAGTTCAAAAAGAGTTGTTGCCAATAG 2763 0.4032 MEANEAKFSAFPFKPYSIQMDFMNALYQSLNHGGVSMLESPTGTGKTMSVICSALQWVLDQRKQQESQHACCKDQANGDGCVGSDDEPDWMRDFIVNKDQQAKEEKVKSKKDKFSGKSDKKKKEGKGICKDFGVAVGEDSPAEKASQSLQKKLDAEDVDDKEFLLEEYESENEEVVGSKTSKRKSVKSVINSSSEDESDNGDEEEQEEKKFKVYFCSRTHSQLSQFIKELQKTVFADEMSVVSLGSRKNLCINEDVLSLGNSTRINERCLELQKKKKKEATKVKSLRVGVGARRTKATSGCPMLRKHKLQQEFRNEVSQQGPLDIEDLANLGRTLGTCPYYGSRSMVLSAELVVLPYQSLLSKSSREALGLNLKSNIVIIDEAHNLADSLISMYDSKITLSQLENVHCHVERYFARFRNLLGPANRRYIQTLMVLTRAFLRVLLNEKSENVIDPCSDKEKASEESTTSDFTMATNDFIFELNIDNINLLKLLKYIKESNIMHKVSSYGEKLATSDRKSALDKIREQGEEGSCQSAFQALADVLLSLTNNDSDGRIIISRSRPTELRKQGGYIKYVMLSGEKIFSEIVDQAHAVLLVGGTLQPIEETRERLFPWLPPNQLHFFSCGHIVPPDSIMPIAVSRGPSGRSFDFSYNSRSSPDTMRELGLLLCNLVTVVPEGIVVFFPSFDYEGKVYENWESSGILQRITRKKRIFREPRNNMDVESVLKEYKDTICTLSSTKSEANQSSHNGAVLLAVVGGKISEGINLSDGMGRCIVMVGLPYASPSDIELLERIKHIEGFRNSKSLENRRFSSGYEVYRGDAQGGFDILRSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRYASDSSKRSFSHPINKLPQWIKDRLVCSTKNYGEVHRLLHQFFKFKKSCCQ* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0237 920 Gene3D - 12 79 IPR027417 -
Aev09g0237 920 Pfam Helicase C-terminal domain 667 883 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Aev09g0237 920 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 397 IPR027417 -
Aev09g0237 920 Pfam DEAD_2 215 403 IPR010614 GO:0003677|GO:0003678|GO:0005524
Aev09g0237 920 SMART ultradead3 11 465 IPR014001 -
Aev09g0237 920 SMART deadxpd 7 426 IPR006554 GO:0003678|GO:0016818
Aev09g0237 920 SMART Cxpdneu3 685 872 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Aev09g0237 920 Gene3D - 645 885 IPR027417 -
Aev09g0237 920 TIGRFAM rad3: DNA repair helicase (rad3) 173 900 IPR013020 GO:0003678
Aev09g0237 920 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 5 432 IPR014013 GO:0005524
Aev09g0237 920 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 7 904 IPR045028 -
Aev09g0237 920 MobiDBLite consensus disorder prediction 174 205 - -
Aev09g0237 920 CDD SF2_C_XPD 631 870 - -
Aev09g0237 920 Gene3D - 165 443 IPR027417 -
Aev09g0237 920 MobiDBLite consensus disorder prediction 100 125 - -
Aev09g0237 920 PANTHER ATP-DEPENDENT DNA HELICASE DDX11-RELATED 7 904 IPR028331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0237 Aev-Chr9 1947613 1952690 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0237 K11273 - gmx:106794132 1362.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0237 09 1947613 1952690 Aev09g0237 09 1947613 1952690 ECH