Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0200 ATGGAGCTTATTTCGGGTCTACCCGAAGACATAGCTAGAGACTGTTTAATTCGGGTCTCATACCAGCAGCTACCGACGGTGGCATCGGTGTGCAAAGGTTGGAAAACGGAGGTTGAGTCGCCGGATTTCCGCCGTCTACGGCGAAGAACCGGCAGCTCACAGAAACTCCTCGTGATGGTTCAAGCTCAGGTCGACCCGGATAGTAAACCCGGACCCGGTTCAACAAAGCGATTAACTAACCCGGTTTACCGGCTAACGGTGTTTGAGCCGGTAACCGGCAACTGGAGCGAGTTGCCTCCACCACCCGGGTTCGAATCCGGTTTACCAATGTTCTGTCGGGTCGCAAGTGTCGGGTCGGAGATTGTTCTATTGGGCGGGTTGGACCCGGACACGTGGAAGGCTTCTAATAATGTTTTTATCTACGACTTCCTCACCGCGAAGTGGCGTCACGGGGCTCACATGCCGTGTGGGCCCCGCAGCTTCTTCGGGTGCGGGTCAGATCAGCATGGTCGCAAGGTGTTTGTAGCTGGCGGCCACGATGATGAAAAGAACGCCTTGCGATCAGCTCTGGTCTATGATATGTCTGCGGACAAGTGGTATCCGCTGCCCGATATGGCAGCGGAACGCGATGAGTGCACCGTGGCATTTCGTCGCGGTGCACTCGTCGTGATTGGCGGTTACCGGACGGAGATGCAGGGGAGGTTCGAGAAGAGTGCGGAGGTATTTGACTTTGCCACGTGGCAGTGGAGTACAATAGATGAGGACTTCCTTGATTGCGCCACGTGTCCGGGGAACCTGACGGACGGTGGAGATTCGATTGATGGTAACATCATGTTCATGTGCAGCGGCGGCGAGTTATTGGCGATGCATGGGGACACGTGGCAGAGGATGGCGAGGGTTCCGAGTGAGATACGCAACGTGGCGTACGTTGGAACGTTGGATGGGACAGTAGTGGTGGTGATTGGATCTAACGGCCACGGTGAGGCTCATGTTTGTTTCGTTTTTGATGTGAAGAGTTGTAATTGGAGAAAAATTGAGACCCCAGAAAAGTTTAAGGGTCATGTCCAAACAGGTTGCGTTTTGGAGATTTAG 1092 0.5421 MELISGLPEDIARDCLIRVSYQQLPTVASVCKGWKTEVESPDFRRLRRRTGSSQKLLVMVQAQVDPDSKPGPGSTKRLTNPVYRLTVFEPVTGNWSELPPPPGFESGLPMFCRVASVGSEIVLLGGLDPDTWKASNNVFIYDFLTAKWRHGAHMPCGPRSFFGCGSDQHGRKVFVAGGHDDEKNALRSALVYDMSADKWYPLPDMAAERDECTVAFRRGALVVIGGYRTEMQGRFEKSAEVFDFATWQWSTIDEDFLDCATCPGNLTDGGDSIDGNIMFMCSGGELLAMHGDTWQRMARVPSEIRNVAYVGTLDGTVVVVIGSNGHGEAHVCFVFDVKSCNWRKIETPEKFKGHVQTGCVLEI* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0200 363 PANTHER OS02G0208700 PROTEIN 1 363 IPR044595 GO:0080037|GO:2000762
Aev09g0200 363 SUPERFAMILY F-box domain 3 50 IPR036047 GO:0005515
Aev09g0200 363 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 363 - -
Aev09g0200 363 Pfam F-box domain 4 41 IPR001810 GO:0005515
Aev09g0200 363 Pfam Kelch motif 212 251 IPR006652 GO:0005515
Aev09g0200 363 Pfam Kelch motif 163 205 IPR006652 GO:0005515
Aev09g0200 363 Pfam Kelch motif 112 155 IPR006652 GO:0005515
Aev09g0200 363 Gene3D - 44 360 IPR015915 GO:0005515
Aev09g0200 363 SUPERFAMILY Kelch motif 80 346 IPR015915 GO:0005515
Aev09g0200 363 SMART kelc_smart 120 169 IPR006652 GO:0005515
Aev09g0200 363 SMART kelc_smart 172 219 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0200 Aev-Chr9 1692947 1694038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0200 7 222 Miscellaneous Gene Families AT4G33900 23.431 8.84e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0200 - - ccaj:109808365 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0200 09 1692947 1694038 Aev09g0200 09 1692947 1694038 ECH
Aev10g1547 10 18382029 18383111 Aev09g0200 09 1692947 1694038 PCT