Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0197 ATGGGTGCTTCTCTGCCTCCAAAGGAAGCCAACCTCTTCAAGCTCATTGTTAAATCATATGAAACCAAACAATATAAAAAGGGCCTCAAAGCCGCTGATGCCATTTTGAAAAAATTTCCAGACCATGGAGAAACTTTATCAATGAAGGGTTTGACACTAAATTGCATGGATCGTAAGTCTGAAGCCTATGAACTCGTTCGTCAAGGATTAAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTCTTTGGTCTCCTCTACCGGTCAGACAGAGAATACAGGGAGGCAATTAAGTGCTACAGAAATGCACTGAAAATAGATCCTGACAATATTGAAATCCTGCGTGATCTATCCCTCTTACAGGCCCAAATGCGAGATTTAAGTGGCTTTGTTGAGACAAGACAACAACTTTTGACTCTGAAGCCTAACCATCGTATGAATTGGATCGGGTTTTCCGTTGCCCATCATTTGAACTCTAATGCATCAAAGGCAGTTGAAATTTTGGAAGCTTATGAAGGGACTTTAGAAGATGATTATCCTCCAGAAAATGAACGGTGTGAGCATGGGGAGATGCTTTTATATAAGATCTCTTTGTTAGAGGAATGCGGATTTCTGGAGAGAGCTCTGGAGGAGTTGCGCAAAAAAGAGCCGAAAATTGTTGATAAACTTGCCTATAAAGAACAAGAGGTTGCACTTCTAGTGAAGCTTGGTCGCTTAGAAGAAGGCGAAGCTTTGTACCGAGTCTTACTTTCCATGAATCCTGATAATTATAGGTACTATGAAGGTCTCCAGAAATGTGTTGGGTTGTATTCAGAAAATGGCCAGTACTCTTCTGATGAAATAGATCGGTTAGATTCTTTGTACAAAGCACTCAGCCAACTATATAAATGGTCTTCAGCTGTCAAGAGAATACCACTAGACTTTCTGCAAGGTGAAAAATTTCGAGAAGCGGCAGATAATTATATTAGGCCTCTCCTAACGAAGGGAGTTCCATCTCTTTTCTCTGACCTTTCTTCTTTATACAAGCACCCTGGGAAGGCAGACATTTTGGAACAACTTATTCTTGAGTTAGAGCATTCAATTAGGACGTTGGGCCAATATCCTGGGAGGGTGGAAAAAGAACCTCCTTCAACTCTTTTGTGGACTTTGTTTTTATTGGCTCAGCATTATGACAGACGGGGTCAATATGAAATTGCTCTTTCCAAAATTGACGAGGCCATAGAACACACACCTACTGTGATTGATTTATATTCTGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGACTGCCGCTGCTGCATTTGCAGATGAAGCTAGGTGTATGGACCTCGCTGATCGTTATGTTAATAGTGATTGTGTTAAGCGCATGCTGCAGGCTGATCAGGTTACTTTGGCTGAAAAAACTGCTGTATTGTTTACAAAAGATGGGGATCAACACAACAATCTTCATGACATGCAGTGCATGTGGTATGAGCTTGCCTCTGGAGAAAGTTATTTCCGTCAGGGTGATCTTGGACGGGCACTTAAGAAATTTTTAGCAGTGGAGAAGCATTATGCAGATATTACTGAAGACCAATTTGATTTTCATTCATACTGCTTAAGAAAAATGACTTTGCGTACTTATGTGGAAATGCTTAAATTTCAAGACCGATTGCACTCACATGTATACTTCCATAAAGCAGCAGCTGGAGCCATCAGATGTTATATTAAGCTGCATGATTCTCCCCCAAAGTCTACAGCTGAGGAAGATGATGATATGTCTAAGTTGCCTCCTTCTCAGAAAAAGAAAATGAGACAAAAACAGAGAAAGGCAGAAGCAAGAGCTAAGAAAGAGGCAGAGGAAAAGAATGAAGAGTTGAGTACTGGTGGAGTATCAAAGTCTGGTAAACGCCATGTAAAACCCGTTGATCCTGATCCTCACGGAGAGAAGCTGCTGCAGGTTGAAGATCCACTGTCAGAAGCCACAAAATACTTGAAGTTGCTGCAGAAGCATTCACCTGATTCATTGGAGACACACTTGCTCGCATTTGAATTGTATTCAAGAAAGCATAAGATTTTGCTTGCTTTTCAGGCTGTGAAGCAGTTGCTGAGATTGGATGCAGAACATCCTGATTCTCATCGTTGCCTGATTAAGTTCTTCCATAATGTGGGGTCCATGAACGCTCCTGTGACTGACAGCGAGAAACTGATTTGGAGTGTCTTAGAAGCTGAGCGCGCAACTATTAGTCAGCTGCATGAGACATCTTTGCTTGAGGCTAACAACTGTTTCCTTGAAAATCATAAAGATTCTCTGATGCATAGAGCAGCTTATGCGGAAACCTTGTACATTTTGGATTCAAACAGAAAATCTGAGGCTGTCAAGTTGCTTGAAGAGTCAACAAATAACTTGGCACCAAGAAATGGAGCACTTGGACCAATCGGGGAGTGGACACTTAAAGACTGTATTGCAGTACACAAACTTCTCGGAACTGTGCTTGTTGACCAGGATGCAGCACTGAGATGGAAATCACGTTGTGCCGAGTACTTCCCTTACTCTAGATACTTCGAGGGTAGCCACAGCTCCGCCTCTCCCAACTCAACGTTCAGTCAGTTGTGCAAGAACTCCGACAATGAGAGCCTTAATCATTCTGCGGGAAATCAAAATGCAGGGCCCATCAAATCAAACGGAAAGCTTGAGGCATTTAAAGATCTCACTATCTAA 2706 0.4194 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVFGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLSGFVETRQQLLTLKPNHRMNWIGFSVAHHLNSNASKAVEILEAYEGTLEDDYPPENERCEHGEMLLYKISLLEECGFLERALEELRKKEPKIVDKLAYKEQEVALLVKLGRLEEGEALYRVLLSMNPDNYRYYEGLQKCVGLYSENGQYSSDEIDRLDSLYKALSQLYKWSSAVKRIPLDFLQGEKFREAADNYIRPLLTKGVPSLFSDLSSLYKHPGKADILEQLILELEHSIRTLGQYPGRVEKEPPSTLLWTLFLLAQHYDRRGQYEIALSKIDEAIEHTPTVIDLYSVKSRILKHAGDLTAAAAFADEARCMDLADRYVNSDCVKRMLQADQVTLAEKTAVLFTKDGDQHNNLHDMQCMWYELASGESYFRQGDLGRALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLKFQDRLHSHVYFHKAAAGAIRCYIKLHDSPPKSTAEEDDDMSKLPPSQKKKMRQKQRKAEARAKKEAEEKNEELSTGGVSKSGKRHVKPVDPDPHGEKLLQVEDPLSEATKYLKLLQKHSPDSLETHLLAFELYSRKHKILLAFQAVKQLLRLDAEHPDSHRCLIKFFHNVGSMNAPVTDSEKLIWSVLEAERATISQLHETSLLEANNCFLENHKDSLMHRAAYAETLYILDSNRKSEAVKLLEESTNNLAPRNGALGPIGEWTLKDCIAVHKLLGTVLVDQDAALRWKSRCAEYFPYSRYFEGSHSSASPNSTFSQLCKNSDNESLNHSAGNQNAGPIKSNGKLEAFKDLTI* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0197 901 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 880 - -
Aev09g0197 901 MobiDBLite consensus disorder prediction 577 594 - -
Aev09g0197 901 MobiDBLite consensus disorder prediction 577 648 - -
Aev09g0197 901 Coils Coil 195 215 - -
Aev09g0197 901 SMART tpr_5 380 413 IPR019734 GO:0005515
Aev09g0197 901 SMART tpr_5 43 76 IPR019734 GO:0005515
Aev09g0197 901 SMART tpr_5 77 110 IPR019734 GO:0005515
Aev09g0197 901 SUPERFAMILY TPR-like 384 720 IPR011990 GO:0005515
Aev09g0197 901 SUPERFAMILY TPR-like 21 263 IPR011990 GO:0005515
Aev09g0197 901 PANTHER BNAC02G23120D PROTEIN 10 880 - -
Aev09g0197 901 Gene3D - 2 503 - -
Aev09g0197 901 MobiDBLite consensus disorder prediction 631 648 - -
Aev09g0197 901 PIRSF NAT_A 1 818 IPR021183 -
Aev09g0197 901 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Aev09g0197 901 Coils Coil 596 620 - -
Aev09g0197 901 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Aev09g0197 901 MobiDBLite consensus disorder prediction 606 622 - -
Aev09g0197 901 Gene3D - 505 725 - -
Aev09g0197 901 Pfam TPR repeat 84 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0197 Aev-Chr9 1655068 1666386 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0197 K20792 - gmx:100820094 1605.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0197 09 1655068 1666386 Aev09g0197 09 1655068 1666386 ECH
Aev10g1544 10 18358056 18366756 Aev09g0197 09 1655068 1666386 PCT