Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0165 ATGGAAGCCTTAAAGTTGCAGAGTTTGCTTCTTCCCACAACATTATCCATTGTTGCAAGAAAACCACAATCATTGGAGCTCAAGAACAATAACTTCATCACACATAAAGCTTTGAGCTTTACCTCATCATCATCATCTTGTTCTTCAGCTGTTACTGTGAGAGCAGGGTGGTTCCTTGGTCTTGCAGATAACAAGAATAAAAAGGTGAGCTTGCCTGATACAGTGAAAGCTGGTGACCCAGTTCTTCATGAACCTGCTGAGGAAGTTGACCCCAGTGAGGTGAAGAGTGAGAGGGTTCAGAAGATCATTGATGACATGATTAGGGTCATGAGGAATGCTCCTGGTGTTGGTTTAGCAGCACCCCAGATTGGAATTCCATTGAGGATAATTGTTTTGGAGGATACCAAGGAGTATATTGGTTATGCCCCAAAGGAAGAGATCAAAGCTCAAGATAGACGACCTTTTGATCTTTTGGTGATCCTGAATCCCAAGCTAGAGAAGAAGAGCAACAAGACTGCACTGTTTTTTGAAGGGTGTTTGAGTATTGATGGATTCAGAGCAGTGGTGGAGCGGCACCTTGACGTTGAAGTTACCGGTTTGGATCGATATGGTGAGCCAATCAAAATAACTGCTACCGGTTGGCAGGCACGGATTTTACAGCACGAGTTTGATCACTTAGAAGGAACACTTTATGTCGATAAGATGGTACCTAGAACCTTCAGAACCGTGGAAAACCTGATCCTACCGCTTGCCAAGGGGTGTCCTAAAGTCGGCCCTCGCTAA 783 0.4444 MEALKLQSLLLPTTLSIVARKPQSLELKNNNFITHKALSFTSSSSSCSSAVTVRAGWFLGLADNKNKKVSLPDTVKAGDPVLHEPAEEVDPSEVKSERVQKIIDDMIRVMRNAPGVGLAAPQIGIPLRIIVLEDTKEYIGYAPKEEIKAQDRRPFDLLVILNPKLEKKSNKTALFFEGCLSIDGFRAVVERHLDVEVTGLDRYGEPIKITATGWQARILQHEFDHLEGTLYVDKMVPRTFRTVENLILPLAKGCPKVGPR* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0165 260 PANTHER PEPTIDE DEFORMYLASE 27 259 IPR023635 GO:0042586
Aev09g0165 260 Pfam Polypeptide deformylase 75 238 IPR023635 GO:0042586
Aev09g0165 260 Gene3D Peptide deformylase 70 259 IPR036821 -
Aev09g0165 260 CDD Pep_deformylase 75 231 IPR023635 GO:0042586
Aev09g0165 260 Hamap Peptide deformylase [def]. 70 246 IPR023635 GO:0042586
Aev09g0165 260 TIGRFAM pept_deformyl: peptide deformylase 75 238 IPR023635 GO:0042586
Aev09g0165 260 SUPERFAMILY Peptide deformylase 71 243 IPR036821 -
Aev09g0165 260 PANTHER PEPTIDE DEFORMYLASE 27 259 - -
Aev09g0165 260 PRINTS Peptide deformylase signature 189 207 IPR023635 GO:0042586
Aev09g0165 260 PRINTS Peptide deformylase signature 177 188 IPR023635 GO:0042586
Aev09g0165 260 PRINTS Peptide deformylase signature 208 237 IPR023635 GO:0042586
Aev09g0165 260 PRINTS Peptide deformylase signature 104 133 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0165 Aev-Chr9 1427329 1429476 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0165 K01462 - gmx:100784292 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0165 09 1427329 1429476 Aev09g0165 09 1427329 1429476 ECH