Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0120 ATGTCATCTCTGAGTAGGGAATTGGTGTTCTTGATCTTGCAGTTTCTGGATGAGGAAAAGTTCAAGGAGACTGTTCACAAGCTTGAACAGGAATCTGGATTTTTCTTCAACATGAAGTATTTTGAGGATGAAGTTCATAATGGCAATTGGGATGAGGTTGAGAAGTACCTATCTGGTTTCACAAAAGTAGATGATAATAGGTACTCTATGAAGATATTTTTTGAGATAAGGAAACAGAAGTATCTGGAGGCATTAGATAAGCATGACCGGTCTAAGGCTGTAGAAATCTTAGTGAAGGATTTGAAAGTGTTTGCCACGTTTAATGAAGAACTGTTCAAGGAAATCACACAGCTTTTGACATTGGAGAATTTTAGGGAAAATGAACAATTGTCTAAGTATGGTGACACTAAGTCTGCTAGGGCAATCATGTTGGTTGAGCTCAAAAAGCTCATTGAAGCTAATCCGTTGTTTCGCGACAAATTGCAATTTCCTAACCTTAAGAACTCGAGGTTACGGACTCTCATCAATCAAAGCTTGAATTGGCAGCATCAACTTTGCAAGAATCCACGGCCAAATCCTGATATAAAAACTCTTTTTGTTGATCACTCATGCGGGCAACCAAATGGTGCACGAGCTCCTTCACCGGCTAATAATCCTCTACTAGGAGCCTTACCAAAGGCTGGAGGGTTTCCTCCTCTTGGCGCTCATGGGCCTTTTCAACCTACTCCAGCACCGGTTCCAACACCCTTGGCTGGGTGGATGTCAAATCCTACCCCTGTGGCGCATCCTGCAGTTTCTGGAGGTGGAGCTATAGGCCTTGGTGCTCCATCAATCCCTGCTGCTTTGAAGCATCCTAGGACCCCACCTACTAATCCTTCTGTTGACTATCCATCTGGTGACTCAGATCATGTTGCTAAGAGAACTCGGCCAATGGGAATATCAGATGAGGTAAATCTTCCTGTCAATGTGTTGTCAGCGACATTCCCGGGTCACGGACATGGTCAGGCTTTCAATGCTCCTGATGACTTGCCAAAGACTGTCGTACGGACTCTAAATCAGGGTTCATCTCCTATGAGCATGGACTTTCATCCAGGGCAGCAGTCTTTACTTCTTGTTGGAACAAATGTGGGGGACATTGCTTTGTGGGAGGTGGGCTCTAGGGACCGATTGGTCTTGAGGAACTTCAAAGTTTGGGACCTTAGTGCATGTTCGATGCCATTTCAGGCTGCTCTTGTCAAAGATCCAGGTGTTTCTGTCAACCGTGTCATTTGGAGTCCTGACGGTGCTTTATTCGGAGTTGCTTACTCGAGGCACATTGTTCAGATATACTCTTATCATGGTGCGGATGATGTTAGACAGCACCTGGAGATTGACGCTCATGTTGGTGGAGTAAATGATCTTGCATTTTCCCATCCAAATAAGCAACTATGCGTGATAACCTGTGGTGATGATAAGACAATTAAGGTGTGGGATGCTGCTACGGGTGCAAAGCAATATACTTTTGAAGGTCATGAGGCTCCAGTTTATTCTGTCTGCCCGCATTATAAAGAAAACATTCAGTTCATCTTTTCAACAGCATTAGATGGAAAAATAAAAGCATGGTTGTATGACAATTTGGGATCTCGTGTTGATTATGATGCTCCTGGTCGTTGGTGCACAACCATGGCTTACAGTGCTGATGGTTCAAGGCTCTTTTCATGCGGGACTAGCAAAGATGGGGAATCCTCTATTGTTGAGTGGAATGAAAGTGAAGGAGCTGTGAAAAGGACTTATCAAGGATTCCGCAAGCGGTCTTTGGGTGTTGTACAATTTGATACCACCAAAAATCGATTTTTGGCTGCTGGTGATGATTTCTCCATTAAATTCTGGGACATGGACAATGTTCAGCTTTTGACAACTGTTGATGCTGATGGGGGTCTACCTGCAAGCCCGCGTATCCGTTTCAACAAGGATGGAACTCTTCTAGCCGTATCTGCCAATGAGAATGGAATTAAAATTTTAGCCAATGCTGATGGTATGCGCCTGTTGCGTGCATTAGAGAATTCTTTATATGATGCATCGAGAACATCTGAAGCGATGGCAAAGCCTACAATAAATCCAATTTCTGCTGCTGCTGCTGCTGCAACTAGTGCTGCACTTGCAGAGAGGGCCTCTTCTGTAGTAGCTATTGCCGGAATGAATGGGGATGCACGAAACTTGGGTGATGTTAAACCTAGAATAAGTGAAGAATCCAATGACAAGTCAAAGATATGGAAGCTCACTGAAATTAATGAACCATCTCAATGTAGATCCTTGAAGCTACCGGATAATGTTAGAGTACCCAAGATATCAAGGTTGATATATACAAATTCAGGTAATGCTATTCTAGCATTAGCATCGAATGCCATTCACCTGCTCTGGAAATGGCAGCGAAATGACCGTAACTCGTCTGGCAAGGCCACTGCCAGCATGCAACCTCAGTTGTGGCAACCATCTAGTGGCATCCTGATGACCAATGACATTGCGGATAGCAATCCGGAGGATGCTGTACCGTGCTTTGCTCTGTCCAAAAATGATTCATATGTAATGTCTGCATCGGGAGGGAAGATATCCCTATTCAATATGATGACTTTTAAGACGATGACGACTTTCATGCCTCCACCACCTGCAGCAACATTTCTTGCTTTTCATCCGCAGGATAACAATATCATTGCCATAGGCATGGATGACTCCTCCATTCAGATATATAACGTCCGTGTTGATGAGGTTAAAAGTAAACTCAAGGGCCACACCAAAAGAATAACTGGTCTTGCTTTCTCTCATGTGTTGAACGTGCTAGTTTCATCTGGAGCGGATGCTCAGATTTGTGTGTGGAATACTGATGGATGGGAAAAGCAAAAAAGTCGATTCTTGCAGATTCCTCCCGGGAGGACTCCACCAGCGCAGGCTGATACCCGAGTACAGTTTCATCAAGATCAGATCCATTTCTTGGTTGTACATGAAACTCAGCTTGCCATCTACGATGCCACAAAACTAGAGGGATTAAAGCAGTGGTTTCCACGAGATTCAGCCGCACCGATATCGCACGCAACTTTCTCATGCGATAGCCAGTTGATATATGCCAGCTTCTTAGATGCAACAGTGTGTGTATTTAGTGCTTCCAACCTCAGATTACGATGTCGCATCAATCCTTCTGCATATCTTCCTGCAAGCGTCAGTTCCAACGTACAACCACTTGTAATTGCGGCGCATCCACAAGAGCCGAATCAGTTTGCTGTAGGACTGTCGGACGGCGGAGTTCATGTCTTTGAGCCGCTTGAATCAGAAGGCAAGTGGGGTGTGCCTCCACCAGTTGAAAATGGCTCAGCAACCATGGCTTTGCGAACGATGACTCGAAATTTGGGCAATAAGTTCTTTCCCTTATTGTCTTCCACTTCCAGCTTACATTCACATGCAACAAGTTTTGGGTTCAAAGAAGTGAAAGAGGAAGAAAAAGCTGCAATGGTTGGTAATGTCTTCTCGAATGTCGCAGCTAACTACGACCTAATGAATGATTTCATGAGTGCTGGTTTGCATAGACTTTGGAAGGATAGACTAGTTTCCAAGCTCAATCCTTTTCCTGGAATGAAGCATCTTGATGTAGCTGGTGGCACAGGGGATGTTGCTTTTAGAATCTTAGAAAACATAAACAGAGTTAAGCATAGAGGAATTCGACGTGCTTTTGAAGATACATTAGAGGCAGAAACTCAGATATATGTATGCGACATAAACCCTAACATGTTAAATGTTGGCAAACACAGAGCCTCAGAGAAAGGATTTGGAGAAGATGGTTCCCTTATATGGGTAGAGGGAAATGCTGAAAGCTTGAGCTTCGAAAACGATTCAATGGATGGTTACACTATTGCATTTGGGATAAGGAATGTCACCCACATAGAGAAAGTTCTTAGTGAAGCTCACCGGGTGTTGAAACGTGGAGGAAGGTTCCTTTGTCTTGAACTTAGCCATGTTGGAATCCCTGTATTTAAAGAATTGTACGACTTTTATTCTTTCTCAGTTATTCCATCCATGGGAGAGATGGTTGCCGGTGATCGGGAATCCTATCAGTACTTGGTTGAGAGTATCCGGCGTTTCCCTCCACAGGAGAAATTTGCATCAATGATTGCAGATGCAGGGTTCCAGAAAGTAGAGTATGAGAATCTTATTGGGGGAGTGGTTGCCATCCATTCAGGGCTGAAACTTTGA 4221 0.4399 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKHDRSKAVEILVKDLKVFATFNEELFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFVDHSCGQPNGARAPSPANNPLLGALPKAGGFPPLGAHGPFQPTPAPVPTPLAGWMSNPTPVAHPAVSGGGAIGLGAPSIPAALKHPRTPPTNPSVDYPSGDSDHVAKRTRPMGISDEVNLPVNVLSATFPGHGHGQAFNAPDDLPKTVVRTLNQGSSPMSMDFHPGQQSLLLVGTNVGDIALWEVGSRDRLVLRNFKVWDLSACSMPFQAALVKDPGVSVNRVIWSPDGALFGVAYSRHIVQIYSYHGADDVRQHLEIDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGAKQYTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNLGSRVDYDAPGRWCTTMAYSADGSRLFSCGTSKDGESSIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDNVQLLTTVDADGGLPASPRIRFNKDGTLLAVSANENGIKILANADGMRLLRALENSLYDASRTSEAMAKPTINPISAAAAAATSAALAERASSVVAIAGMNGDARNLGDVKPRISEESNDKSKIWKLTEINEPSQCRSLKLPDNVRVPKISRLIYTNSGNAILALASNAIHLLWKWQRNDRNSSGKATASMQPQLWQPSSGILMTNDIADSNPEDAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHTKRITGLAFSHVLNVLVSSGADAQICVWNTDGWEKQKSRFLQIPPGRTPPAQADTRVQFHQDQIHFLVVHETQLAIYDATKLEGLKQWFPRDSAAPISHATFSCDSQLIYASFLDATVCVFSASNLRLRCRINPSAYLPASVSSNVQPLVIAAHPQEPNQFAVGLSDGGVHVFEPLESEGKWGVPPPVENGSATMALRTMTRNLGNKFFPLLSSTSSLHSHATSFGFKEVKEEEKAAMVGNVFSNVAANYDLMNDFMSAGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILENINRVKHRGIRRAFEDTLEAETQIYVCDINPNMLNVGKHRASEKGFGEDGSLIWVEGNAESLSFENDSMDGYTIAFGIRNVTHIEKVLSEAHRVLKRGGRFLCLELSHVGIPVFKELYDFYSFSVIPSMGEMVAGDRESYQYLVESIRRFPPQEKFASMIADAGFQKVEYENLIGGVVAIHSGLKL* 1407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0120 1406 SMART Lish 4 36 IPR006594 GO:0005515
Aev09g0120 1406 Pfam WD domain, G-beta repeat 457 491 IPR001680 GO:0005515
Aev09g0120 1406 Pfam WD domain, G-beta repeat 919 952 IPR001680 GO:0005515
Aev09g0120 1406 ProSitePatterns Trp-Asp (WD) repeats signature. 478 492 IPR019775 -
Aev09g0120 1406 CDD AdoMet_MTases 1203 1323 - -
Aev09g0120 1406 ProSiteProfiles LIS1 homology (LisH) motif profile. 4 36 IPR006594 GO:0005515
Aev09g0120 1406 Gene3D Vaccinia Virus protein VP39 1168 1406 IPR029063 -
Aev09g0120 1406 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 34 92 IPR006595 -
Aev09g0120 1406 TIGRFAM MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 1162 1405 IPR004033 GO:0008168
Aev09g0120 1406 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 1120 IPR027728 GO:0006355
Aev09g0120 1406 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 457 957 IPR011047 -
Aev09g0120 1406 Gene3D - 820 1105 IPR015943 GO:0005515
Aev09g0120 1406 SUPERFAMILY WD40 repeat-like 343 537 IPR036322 GO:0005515
Aev09g0120 1406 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1154 1399 IPR029063 -
Aev09g0120 1406 Gene3D - 548 682 IPR015943 GO:0005515
Aev09g0120 1406 ProSiteProfiles Trp-Asp (WD) repeats profile. 602 633 IPR001680 GO:0005515
Aev09g0120 1406 ProSiteProfiles Trp-Asp (WD) repeats profile. 457 500 IPR001680 GO:0005515
Aev09g0120 1406 SMART ctlh 34 92 IPR006595 -
Aev09g0120 1406 ProSitePatterns ubiE/COQ5 methyltransferase family signature 2. 1313 1327 IPR023576 GO:0008168
Aev09g0120 1406 Pfam ubiE/COQ5 methyltransferase family 1157 1405 IPR004033 GO:0008168
Aev09g0120 1406 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1153 1405 IPR004033 GO:0008168
Aev09g0120 1406 SUPERFAMILY YVTN repeat-like/Quinoprotein amine dehydrogenase 980 1112 IPR011044 -
Aev09g0120 1406 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 920 952 - -
Aev09g0120 1406 ProSiteProfiles Trp-Asp (WD) repeats profile. 920 961 IPR001680 GO:0005515
Aev09g0120 1406 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 1 1120 - -
Aev09g0120 1406 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 1157 1405 IPR004033 GO:0008168
Aev09g0120 1406 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 1173 1188 IPR023576 GO:0008168
Aev09g0120 1406 Gene3D - 331 547 IPR015943 GO:0005515
Aev09g0120 1406 SMART WD40_4 405 444 IPR001680 GO:0005515
Aev09g0120 1406 SMART WD40_4 584 624 IPR001680 GO:0005515
Aev09g0120 1406 SMART WD40_4 870 910 IPR001680 GO:0005515
Aev09g0120 1406 SMART WD40_4 1005 1045 IPR001680 GO:0005515
Aev09g0120 1406 SMART WD40_4 538 581 IPR001680 GO:0005515
Aev09g0120 1406 SMART WD40_4 913 952 IPR001680 GO:0005515
Aev09g0120 1406 SMART WD40_4 830 867 IPR001680 GO:0005515
Aev09g0120 1406 SMART WD40_4 494 535 IPR001680 GO:0005515
Aev09g0120 1406 SMART WD40_4 450 491 IPR001680 GO:0005515
Aev09g0120 1406 SMART WD40_4 344 383 IPR001680 GO:0005515
Aev09g0120 1406 SMART WD40_4 1058 1097 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0120 Aev-Chr9 1084771 1095806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g0120 455 668 Miscellaneous Gene Families AT5G08390 23.744 2.22e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0120 - - gmx:100795759 2148.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0120 09 1084771 1095806 Aev09g0120 09 1084771 1095806 ECH