Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g0088 ATGCCAATACAATTCCCAGACGGAGACTCATTCATCATCCGCGATGTTTGGAGCTCGAACGTCGATCAAGAATTCGCCATAATCCGCGGCATCGTCGACAAGTTCCCTTACATCGCCATGGACACCGAGTTCCCTGGCATCATAGTCAGCCACGTCGGCGGGACCCCAGATGTGAACTACAAAACCCTAAGAAGCAACGTAAACCCCCTCAAGCTCATCCAACTAGGCCTAACCTTCTCCGACGAACACGGCAACCACCCCACCGTCACCGTCACAGACGACAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCAGCAGCAAAAAGAAGAACCAGGGAGAGAAATTCTGCGTATGGCAATTCAACTTCCGAGAGTTCAACGTGAAATCCGATGTGTACGCACCAGACTCAATCCAGCTTCTGATAAAAAGCGGAATCGATTTCAAAAGGAACATGCGAGACGGCATCGACGTGCGTCGTTTCGGTGAACTGCTATCGGCTTCGGGAGCAGTCCGAAACGACAGAATTCACTGGGTAACGTTCCATAGCGCCTACGATTTTGGGTATTTGTTGAAGTTGCTGAAAGGTGAAGATTTGCCGGAAACTAAAGAAGGTTTCTTTGAATTAATGAATCTGTATTTTCCTAGGGTTTATGATATGAAGTACTTGATGAGGTTTTGTAATAATCTTTTTGGTGGATTGGATAAGCTTGCTGAGCTTTTGGAGGTTAGGAGAATTGGGGTTCGTCACCTAGCTGGTTCTGATAGTTTGTTAACCTGTCACTCGTTTCTCAGGATGAAGGAGAAGTATTTCAGTGACTCGTTGGTTCAGTATAGAGGCGTCTTGTTTGGGTTAGGTAGTGGTGCTAGTGGTACTGATGCTAGTGGTGGTGGTGCTAGTGGTGGTGGTAGCAGTACTGGTGGTGCTAGTGGTGGTGGTGGCAGTAGTGGTGGTGCTTCTTCACATTGA 978 0.4877 MPIQFPDGDSFIIRDVWSSNVDQEFAIIRGIVDKFPYIAMDTEFPGIIVSHVGGTPDVNYKTLRSNVNPLKLIQLGLTFSDEHGNHPTVTVTDDSSSSSSSSGSSSSGSSKKKNQGEKFCVWQFNFREFNVKSDVYAPDSIQLLIKSGIDFKRNMRDGIDVRRFGELLSASGAVRNDRIHWVTFHSAYDFGYLLKLLKGEDLPETKEGFFELMNLYFPRVYDMKYLMRFCNNLFGGLDKLAELLEVRRIGVRHLAGSDSLLTCHSFLRMKEKYFSDSLVQYRGVLFGLGSGASGTDASGGGASGGGSSTGGASGGGGSSGGASSH* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g0088 325 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 2-RELATED 7 92 - -
Aev09g0088 325 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 2-RELATED 117 289 - -
Aev09g0088 325 Gene3D - 1 291 IPR036397 GO:0003676
Aev09g0088 325 SUPERFAMILY Ribonuclease H-like 4 288 IPR012337 -
Aev09g0088 325 MobiDBLite consensus disorder prediction 296 325 - -
Aev09g0088 325 Pfam CAF1 family ribonuclease 182 243 IPR006941 -
Aev09g0088 325 MobiDBLite consensus disorder prediction 84 113 - -
Aev09g0088 325 MobiDBLite consensus disorder prediction 294 325 - -
Aev09g0088 325 Pfam CAF1 family ribonuclease 16 159 IPR006941 -
Aev09g0088 325 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 7 92 IPR039637 GO:0004535|GO:0030014
Aev09g0088 325 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 117 289 IPR039637 GO:0004535|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g0088 Aev-Chr9 719931 720908 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g0088 K12581 - gmx:100799461 339.347