Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2646 ATGCTCAAGCAATTCCTCAGCAAGCTCCCTCGGAACAAGAAGCTAGACTCGGACGAGTCGACCCGGGTAGTCGACTCGTCCTCTCGACCTAGCTCCTCTTCTGCCCAAAACGATTCCTCACGCGCCGCCGCCGCCGGGAAAAACCAACGGCCAAACTCCGGGGGCAACATCTCCGCAGCTAAACGCACTTCCTCCGTTTTTCCGGCGAGCACCGTTTCAGGGATCGAGCCTCTGATTCCCTTCAAGGACGTTCCATACTCCGAGAAGATGAACCTCTTCGTTAGCAAATTGAGCCTCTGTTGCGTTACCTTCGATTTCACCGACCCTGGTAAGAACACGATCGAAAAAGAAGTGAAAAGGAAAACTTTGGTTGAGCTTGTTGATTTTGTGGCTTCTGGTTCTATCAAGTTCAGTGAACCTGCTATTCTTGCCATGTGTAAAATGTGCGCAATTAACCTGTTCCGTGTTTTCCCGCCAAATTACCGGTCCAACCGGTTTCCCGGTGGTGGTGGTGGTGGTGAGAATGATGATGATGAGCCAGCTTTTGACCCATCATGGCCACACTTGCAGATTGTGTATGATTTGTTGCTTAAGTTTGTTAGTTCTCCTTGCCTTGATGCAAAGGTGGCAAAGAAGTACATTGATCATACTTTTATTTTGAAGCTGCTTGAGTTGTTTGATTCGGAGGATCCTAGGGAGAGGGATTGCTTGAAAACCATTCTTCATAGGGTTTATGGGAAGTTCATGGTTCATAGGCCTTACATAAGGAAGGCCATTAACAATGTGTTTTATAGGTTTGTGTTTGAGACTGAGAGGCACAATGGGATTGCTGAGTTGTTGGAGATCTTTGGTAGCATTATTAGCGGTTTCGCCTTGCCACTGAAGGAGGAGCATAAGATCTTCTTGTGGAGGGTTTTGATCCCATTGCACAAACCCAAGTCAATGGGGGTCTACTACCAGCAACTGTGCTATGGGGTCACGCAGTTTATAGAGAAGGAGCCGAAGTTGGCGAGCACCGTGATTAGGGGTTTGTTAAAGTATTGGCCTATAACGAATAGTCAGAAGGAGGTGATGTTCCTCGGTGAACTGGAGGAAATTTTGGAACTGATTAACATGGTGGAGTTCCAGAGGGTCATGGTCCCGTTGTTTTGGCGGATTGGATGCTGCATTAACAGCATGCACTTTCAGGTAGCTGAAAGAGCCCTTTTCCTATGGAACAATGACCACATTGTGAACTTGATCGCCCACAACCGTCAAGTGATCCTGCCCATCATATTTCCAGCTTTAGATAGGAACTGTCGAGGCCACTGGAACCCGGCAGTACTCAACTTAACTCATAACGTTAGAAAGATGTTCATGGAGATGGATGAGAAGCTGTTCCTCTCCTGTCTTTCTCAGTTTAAGGAGGAAGAAGCAATGCTAAACTCGGAAGCCGAGAAGCGCAAGGAAGCCTGGGAACAGCTAGAGAAAACAGCCAGTCTCCAGCCGCCACATGTTGTAACTTGTAACATGGTTTTGATTGATGCTGTGATGGATGCAACTTGGTTCCTTCTGTATAGAAAATCTGAGATGAAGCTGCAAAATAAGCTTCATATCGCAGCTTCCTCTTAA 1611 0.4699 MLKQFLSKLPRNKKLDSDESTRVVDSSSRPSSSSAQNDSSRAAAAGKNQRPNSGGNISAAKRTSSVFPASTVSGIEPLIPFKDVPYSEKMNLFVSKLSLCCVTFDFTDPGKNTIEKEVKRKTLVELVDFVASGSIKFSEPAILAMCKMCAINLFRVFPPNYRSNRFPGGGGGGENDDDEPAFDPSWPHLQIVYDLLLKFVSSPCLDAKVAKKYIDHTFILKLLELFDSEDPRERDCLKTILHRVYGKFMVHRPYIRKAINNVFYRFVFETERHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSMGVYYQQLCYGVTQFIEKEPKLASTVIRGLLKYWPITNSQKEVMFLGELEEILELINMVEFQRVMVPLFWRIGCCINSMHFQVAERALFLWNNDHIVNLIAHNRQVILPIIFPALDRNCRGHWNPAVLNLTHNVRKMFMEMDEKLFLSCLSQFKEEEAMLNSEAEKRKEAWEQLEKTASLQPPHVVTCNMVLIDAVMDATWFLLYRKSEMKLQNKLHIAASS* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2646 536 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 501 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aev08g2646 536 PIRSF PP2A_B56 5 525 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aev08g2646 536 MobiDBLite consensus disorder prediction 9 23 - -
Aev08g2646 536 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 501 - -
Aev08g2646 536 MobiDBLite consensus disorder prediction 1 60 - -
Aev08g2646 536 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 80 492 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aev08g2646 536 MobiDBLite consensus disorder prediction 24 60 - -
Aev08g2646 536 Gene3D - 85 491 IPR011989 -
Aev08g2646 536 SUPERFAMILY ARM repeat 91 487 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2646 Aev-Chr8 24876098 24879478 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2646 K11584 - gmx:100775273 805.438