Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2634 ATGGGTACTGCTCCCGCCAGATACCCACCATGTGGAATCCCTCTCCACTCTCACCACCCTCCTCTCCCTCACATACCTGACTCCTCTGCTTCTCACTTCCCTCTTCATCTTCAACTTTCCAGAATTTCCCTCTCCCCGCGTTCTTCTCCAAAGGGATTAATTGACCGAGTACGAGCACTACCTGATATTGATGATATCTTTTGGGAGAAAGTTCCTACACCCATACTTGACACAATTGAGAATCCTCTTTGCTTGAAGAACTTATCACTTAAGGAATTGAAACAATTAGCTGTTGAAATCCATCTAGAGTTGTCTTCTATTATGTCAGATATACAAGTATCCTTGAAAGCAAGTATGGCAGCAGTGGAGCTGACGGTTGCGATACACCATGTTTTCCATGCTCCAGTAGACAAGATATTGTGGGACGTTGGGGATCAAACATATGCACATAAGATTCTTACAGGACGGCGATCCCTCATGAAGACAATACGACAAAAGAATGGCCTTTCTGGATTTACTTCCAGATTTGAGAGTGAATATGATGCATTTGGTGCAGGTCATGGATGCAACAGTATTTCTGCTGGACTTGGCATGGCTGTTGCGCGGGATATGAAGGGGAGGCGAGAACGTGTAGTGGCAGTTATCAGCAATTTGACAACTTTGTCTGGTCAAGTTTACGAGGCAATGAGCAATGCGGGGTATTTGGATTCAAATTTGGTGGTAGTTTTGAATGACAGCCGTCACTCTCTGCTCCCAAAAGTTGATGAGGGCCCAAAGACATCTGTCAATGCCCTATCTAGCACCCTAAGCAAGCTCCAGTCTAGTAAATCGTTTCGAAGATTCAGAGAAGCTGCTAAGGGTGTTACGAAACGAATTGGTAGAGGTATGCATGAGTTGGCAGCCAAAGTTGATGAATATGCTCGTGGTATGATCGGCCCACTAGTTTACTCTTTTGAAGAGCTTGGGTTGTACTACATAGGCCCAGTGGATGGTCGTAATGTTGAAGATCTAATCTGTGTTCTGCAAGAAGTTGCTTCCCTAGATTCAATGGGTCCTGTCTTGGTTCATGTGATAACTGATGAACATCAAGGAGAAGAAAACAATCAAAAGGGTTGTATAATAAATAACCAACATGATGATTCTATTAAATCCGATTCATTGCATAACAATGTCTGGCCTCGAACATATGGAGATTGCTTTGTGGAGACTTTGGTTGCAGAAGCAGAGAAAGACAAAGATATTGTGGTTGTTCATGCAGGAACCATGATGGAGCCATCACTTGAGTTGTTCCAGGAAAAATTTCCAGATAGGTTTTTTAATGTAGGAATGGCTGAACAGCATGCAGTCACATTTGCTTCTGGTTTGTCATGTGGTGGATTGAAGCCATTTTGTGTTATACCTTCCTCCTTTCTACAGAGGGCTTACGACCAGGTGGTCCATGATGTTGATCAACAGAAAATTCCAGTGCGTTTTGTCATCACAAGTGCGGGATTGGTAGGTTCTGATGGTCCTCTCCAATGTGGGGCATTTGATATAACCTTTATGTCATGCTTGCCAAACATGATTGTCATGGCGCCCTCCGATGAAGTTGAACTCATTCACATGGTGGCTACTGCAACTCAAATCAATGATCGGCCCGTTTGCTTTCGGTATCCCAGGGGTGCTTTGGTTGGGAAAGATCACACTCCGTGTGAAGGAGTACCCATTAAGATCGGAGAAGGAAGAGTTCTTGTTGAAGGTAAAGACGTTGCTTTACTGGGATATGGATCAATGGTTCAAAACTGCCTTAATGCTCATACACTTCTTGCAAAGCTTGGAATTGAGGTGACTGTTGCTGATGCAAGGTTCTGCAAGCCGCTTGATATCAAGCTTCTGAGGCAGCTCTGTAAACACCATTCTTTCCTCATTACTGTCGAGGAAGGATCTATAGGAGGATTTGGTTCCCATGTTGCTCAGTTTGTTGCACTTGATGGACTACTTGATGGAAGAATCAAGTGGCGACCGATTATGCTACCGGACAGTTATATTGAGCATGCATCGCCAAATGAGCAGCTTGACCAGGCAGGGTTAACAGGACATCACATTGCTGCCACAACATTGAGTTTGTTGGGTCGTACCCGTGAAGCTCTCCAATTTATGTGTTCCTGA 2148 0.4423 MGTAPARYPPCGIPLHSHHPPLPHIPDSSASHFPLHLQLSRISLSPRSSPKGLIDRVRALPDIDDIFWEKVPTPILDTIENPLCLKNLSLKELKQLAVEIHLELSSIMSDIQVSLKASMAAVELTVAIHHVFHAPVDKILWDVGDQTYAHKILTGRRSLMKTIRQKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDMKGRRERVVAVISNLTTLSGQVYEAMSNAGYLDSNLVVVLNDSRHSLLPKVDEGPKTSVNALSSTLSKLQSSKSFRRFREAAKGVTKRIGRGMHELAAKVDEYARGMIGPLVYSFEELGLYYIGPVDGRNVEDLICVLQEVASLDSMGPVLVHVITDEHQGEENNQKGCIINNQHDDSIKSDSLHNNVWPRTYGDCFVETLVAEAEKDKDIVVVHAGTMMEPSLELFQEKFPDRFFNVGMAEQHAVTFASGLSCGGLKPFCVIPSSFLQRAYDQVVHDVDQQKIPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEVELIHMVATATQINDRPVCFRYPRGALVGKDHTPCEGVPIKIGEGRVLVEGKDVALLGYGSMVQNCLNAHTLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSFLITVEEGSIGGFGSHVAQFVALDGLLDGRIKWRPIMLPDSYIEHASPNEQLDQAGLTGHHIAATTLSLLGRTREALQFMCS* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2634 715 Pfam Transketolase, pyrimidine binding domain 396 556 IPR005475 -
Aev08g2634 715 Hamap 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 75 704 IPR005477 GO:0008661|GO:0016114
Aev08g2634 715 Gene3D - 572 703 IPR009014 GO:0003824
Aev08g2634 715 Gene3D - 394 567 - -
Aev08g2634 715 PANTHER 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATED 15 714 IPR005477 GO:0008661|GO:0016114
Aev08g2634 715 CDD TPP_PYR_DXS_TK_like 400 553 - -
Aev08g2634 715 Pfam Transketolase, C-terminal domain 572 695 IPR033248 -
Aev08g2634 715 CDD TPP_DXS 115 359 IPR005477 GO:0008661|GO:0016114
Aev08g2634 715 Pfam 1-deoxy-D-xylulose-5-phosphate synthase 76 359 IPR005477 GO:0008661|GO:0016114
Aev08g2634 715 SMART Transket_pyr_3 394 559 IPR005475 -
Aev08g2634 715 SUPERFAMILY TK C-terminal domain-like 567 703 IPR009014 GO:0003824
Aev08g2634 715 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 394 582 IPR029061 -
Aev08g2634 715 PANTHER 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-LIKE PROTEIN 15 714 - -
Aev08g2634 715 Gene3D - 68 367 - -
Aev08g2634 715 TIGRFAM dxs: 1-deoxy-D-xylulose-5-phosphate synthase 78 701 IPR005477 GO:0008661|GO:0016114
Aev08g2634 715 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 73 455 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2634 Aev-Chr8 24775653 24780418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2634 432 651 Acyl Lipid Metabolism Gene Families AT1G55510 25.000 3.32e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2634 K01662 - gmx:100793268 1163.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2634 08 24775653 24780418 Aev08g2634 08 24775653 24780418 ECH