Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2625 ATGAGTAGGCCAGGAGATTGGAACTGCAGGACATGCAACCACCTAAATTTCCAAAGAAGGGAATCGTGCCAACGGTGCGGCGAGCCGAGGGGTATGGCAGGTGGTGACTACGGTGGCGCCTTTGGCGGCGGCAGAGGATCTTCCTCCTTTGGTTTCACCACTGGCCCTGATGTCCGCCCTGGGGACTGGTACTGCACCGTCGGAAACTGTGGTGCTCATAACTTTGCTAGCCGCTCTAGCTGCTTTAAATGTGGTGCCCCCAAGGAGGAGTCATCCGGCAGCGGCCCCAGCGCCGGAGGGTATGACGTTGACATGCCTCGAATGAGAGCCTTTGGCTTTGGTGGTAGTAGTTCTGCTCGTCCCGGTTGGAAGTCTGGCGATTGGATATGTACAAGCTCCGAGAGAGATCTTTATAGAGAGGACGAGGTCGAGGTCGGCGGCGGCGGCGGCGGTTCTTCGTGCGACGGTGGCGGTGATGGGTTGAGCACGATACACAGTTCTCCGCCACGTAACTTATGA 519 0.578 MSRPGDWNCRTCNHLNFQRRESCQRCGEPRGMAGGDYGGAFGGGRGSSSFGFTTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEESSGSGPSAGGYDVDMPRMRAFGFGGSSSARPGWKSGDWICTSSERDLYREDEVEVGGGGGGSSCDGGGDGLSTIHSSPPRNL* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2625 172 ProSiteProfiles Zinc finger RanBP2 type profile. 59 90 IPR001876 -
Aev08g2625 172 Gene3D - 2 32 - -
Aev08g2625 172 Gene3D - 55 91 - -
Aev08g2625 172 MobiDBLite consensus disorder prediction 140 172 - -
Aev08g2625 172 Pfam Zn-finger in Ran binding protein and others 59 89 IPR001876 -
Aev08g2625 172 Pfam Zn-finger in Ran binding protein and others 3 29 IPR001876 -
Aev08g2625 172 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Aev08g2625 172 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Aev08g2625 172 SMART zf_4 61 87 IPR001876 -
Aev08g2625 172 SMART zf_4 5 29 IPR001876 -
Aev08g2625 172 PANTHER ZINC FINGER PROTEIN 1 132 - -
Aev08g2625 172 SUPERFAMILY Ran binding protein zinc finger-like 55 91 IPR036443 -
Aev08g2625 172 ProSitePatterns Zinc finger RanBP2-type signature. 63 84 IPR001876 -
Aev08g2625 172 PANTHER RAN BP2/NZF ZINC FINGER-LIKE SUPERFAMILY PROTEIN 1 132 - -
Aev08g2625 172 SUPERFAMILY Ran binding protein zinc finger-like 2 31 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2625 Aev-Chr8 24689498 24697959 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2625 - - gmx:100811107 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2625 08 24689498 24697959 Aev08g2625 08 24689498 24697959 ECH