Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2620 ATGATTTATTATGCAGCTACTGCTTGTGATGGGAGTAGAAGAGAGCAGTTTCCACCGGGGAATCTGTTTGTAGCAGTGAATGAAGGGTTGTGGGATAATGGAGCAGCATGTGGAAGGCGTTACAGAATTAGGTGCGTGAGTGGCAGCAATAGGCCATGCAGAGGTGGTAGCATTGATGTCAAAGTGGTTGATTTGTGTGATGGCTCATCATGCCCCACCACCTTGCTCATGTCTTCTGATGCTTTTTCATCCATCTCAAGATTCCCTAATGCTAAAATCAACATTGAATATATACAGGATTCCTCTGTTCATGAACATGATGGAAACAAGATGCTCCAATATCATAGAACTAGAAGGCCGCCATATAGATTTGATTCAACATATGCAAGCACGCCGGTGAGCATTCAAGCAGAAAGTGGTGTCTGA 426 0.439 MIYYAATACDGSRREQFPPGNLFVAVNEGLWDNGAACGRRYRIRCVSGSNRPCRGGSIDVKVVDLCDGSSCPTTLLMSSDAFSSISRFPNAKINIEYIQDSSVHEHDGNKMLQYHRTRRPPYRFDSTYASTPVSIQAESGV* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2620 141 Pfam Lytic transglycolase 25 97 IPR009009 -
Aev08g2620 141 PANTHER RLPA-LIKE PROTEIN, DOUBLE-PSI BETA-BARREL-RELATED 4 99 - -
Aev08g2620 141 Gene3D - 3 99 IPR036908 -
Aev08g2620 141 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 6 117 IPR007112 -
Aev08g2620 141 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 4 99 - -
Aev08g2620 141 SUPERFAMILY Barwin-like endoglucanases 8 97 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2620 Aev-Chr8 24664765 24667313 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2620 - - lja:Lj0g3v0337709.1 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2620 08 24664765 24667313 Aev08g2620 08 24664765 24667313 ECH