Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2613 ATGAACTCAGAAAAAAATGTTAAGGCTACAATTGTTACTCAAGTTAGTATCGGTGGATTTGGCAATGAGGTCAAAGCAAAGGATCTTGTGGCATACTTGGAAGATAAAATTGGAATGGTAGACAGATGTCGTTTTGAAAAACTTTCCTGGACCCCTCCGGAGTCTTATCCAGAATTTCATATCATTGATACCGCACGAGTTCCAAGAACAGAAGACTACCAGAAGGTAGAGGCCCATGCCTTTGTGCATTTTGCAATGCCAAAATATGTAACTGATGCCCTCAATGCTGCTGGGTGTCTTGATCTAATTTTGAATAATGTACCGTTGAAGGTTAGTCGTGGGCCTGAAAATCCATTCTCTCTGAACCAGAGGAGAAGAACTTCAACTCCTTTTAAGCTGTCTGACGTAGTTGTTGAAATTGGGACTTTGGTTAGCCCCGAGGAGTTTTTAGTTGCTTGGAGAGGACCTGATAAAGGGGTTAGCTTTCTGGTGGATCCTTTTGACAGCACGTGCAAACTCTGCTTCAACAGAGATATTGCATTTTCATTCAAAGGGAAAGAGAGAAAAGCAGTGATAAAGTGTGATTTTCAGGTGGGATTTTTGGTTAGGGACATAAATGATATAAAGCAATATAAAGATTCATTTTATCATGTTGTTTTATTACACCTAGCTTCATCTCCATGGGTTTGGTACAGAACTGCTGATGATGATATTGAAGACTTGGTTTCCTGTGATTTGCTTGATGATGATGATCCATGGATTAGGACCACAGATTTTACACCCAGTGGGGCCGTTGGTCGATGCAATTTTTATAGAATTTCAATCCCACCTCGCCACGGTTTAAAATTGATGAAGGCCATGGATTACTTGAAAGGTCAAAGAGTGCAAGATATTCCACTTAGACGACCACTTAAGGTAATAGATGAACTGGATTTTGGGGTGCCCATGTCAGATCCCTTCTTCTGCATTCATTCTCAGAAGGATATTACTTTTGACATAATATTCTTGGTTAATGCTATCTTGCACAAAGGCATAATTAATCAGCACAGATTGTCAGATGGGTTTTACGAATTGCTGAGAAATCAACCTAAGGAGGTCAATGTGGCTGCGCTGAAGCACATATGTTCATACAAGCGACCAGTGTTTGATGCTGCTAAGAGGCTAAAACAAGTCCAGGAATGGTTGCTCAGAAACCCAAAACTTTATCAGACCTCTAAACAGCTAGATGATGTTGCTCAGGTTAGAAGACTGGTTATTACTCCGACTAAAGCCTATTGTGTACCACCAGAAGTTGAACTGTCCAACCGTGTTCTCAGAAAATACAAAGAATTTTCAGATCGTTTCTTGAGGGTCACGTTTATGGATGAAGGCATGCAGACAATCAATGTGAATGCTCTTAACTATTATGTTGCTCCCATAGTGAGGGAAATCACATCAAACTCCTTTCCACAGAAGACAAATATATATAGAAGGGTGAAGCATATCCTAGAAGAGGGGTTTCACTTGTGTGGTCGAAAGTATTCATTTTTAGCCTTCTCATCCAATCAACTTAGAGATCGTTCTGCTTGGTTTTTTGCTGAAGAAAGAAAATTGAGTTGTACTGATATAAGAAATTGGATGGGAAAGTTTAATCAGCGCAACATTGCAAAATGTGCTGCTAGGATGGGACTATGCTTCTCATCTACTTATGCAACGGTGGAAGTTGCGGGAAAGGAGGTTAACTCCACATTGCCAGATATTGAGAGGAACAATTTTGTTTTCTCTGATGGAATTGGTATTATTACTCCTGATCTGGCAATGGAAGTAGCAGAAAAATTGAAATTGGAAATTGTACCCTCTGCCTTTCAGATTAGATATGCTGGTTTTAAAGGGGTTGTAGCCTCTTGGCCTGATAAAGGGGATGGGTGCCGACTTTCTTTAAGGCCTAGTATGGAGAAGTTTACTTCTAACCATACTACCTTGGAGATTTGTCAGTGGACCAGGTTTCAGCCTGGTTTTCTTAATAGGCAGATTATAGTATTGCTTTCAGCATTGGATGTATCTGACGAAATATTTTGGACAATGCAGGAGGCAATGATTTCAAGGTTAAATCAAATGCTCGTGGACATAGATGTGGCATTTGATGTTCTCACAAAATCCTGTGCTGAGCATGGCAATGCAGCTGCCATCATGTTAAGTTGTGGTTTCACTCCCCAAAAGGAACCTCATCTTAAAGGGATGTTAACTTCCATACGTGCTGCACAGCTTTGGGGGCTGAGGGAAAAATCTCGGATTTTTGTGTCATCCGGGCGGTGGTTGATGGGTGTATTGGATGAGTCGGGTGTGCTTGAGTATGGGCAGTGCTTTATTCAAGTGTCAAATCCTTCCATCGAGAATTGTTTTTCCAAGCACGGCTCGAGATTTACCGAGACAAAGAACTTACAAGTGGTTAAGGGTTTTGTGGTGATAGCCAAAAATCCATGTCTTCACCCAGGAGACATAAGAGTTCTGGAGGCAGTTGATGCTCCTGGTTTACATCATTTATACGATTGTCTCGTTTTCCCTCAGAAGGGTGAAAGGCCTCACCCAAATGAAGCTTCTGGAAGTGATCTTGATGGAGATCTATATTTTGTAACATGGGATGAAAATCTCATTCCACCTAGTAAGAGGAGCTGGACACCTATGCAGTATGATGCTCAAGAAAGCAAACAGCAGACTCGTCAAGTCACTACTCGGGACATCATAGATTTTTTTGTCAGAAACATGGTAAATGAGCATTTGGGTGCAATATGCAATGCACATGTGGTACATGCTGATGGCAGTAAGTATGGTGCATTGGATGAGAATTGCATAAAACTGGCTGAATTAGCAGCCACTGCTGTTGATTTTCCAAAGACTGGGAAGATTGTCACCATGCCCAATAATTTGAAACCAAAACTGTACCCTGATTTTATGGGGAAAGAGGTACACCAGTCTTATGATTCCAAGAAAATCCTGGGTAGACTTTACAGGCGAATCAAAGATGCTTATGATGAAGATATTAACGAAGCTGATTTGAACCATGGGACCGACGACATACCTTATGATACAGATCTTGAGGTTCCGGGATCTGCTGATTTTATTGCTGATGCGTGGCAACAAAAGTGCTCTTATGATGGCCAATTGAGTGGGCTACTAGGTCAATACAAAGTGAAAAGAGAAGAAGAAATTGTCACTGGGCAGATCTGGTCTATGCCCAAATACAATAGTAGGAAACAAGGGGAGCTTAAGGAGAGGCTCAAGCACTCATATAGTTCCCTGAAAAAAGAATTCAGGCAAACTTTCGAGAGATTGAATTCTGATGCAGGAGAATTAAGCGATGAAGAGAAGAACTTATTGTATGAGCAGAAAGCTTCGGCATGGTATCAGGTTACGTATCATCCTAAATGGGTACAGAAGTCCCTTGACATTCAGTATAAGTCCTCAGAGAACCAAGAGCCAGGGAGTTCGGAAAATATGGTGATGCTGAGCTTTCCTTGGATTGCAGTTGATTACCTTGCTCGCACAAAGATAAGGAGCCGAGGATCTGGAAAGCTTGATTCAACTAAGCCGGTTGATTCTCTGGCGAAGTACCTATCTGAAAGGTTATAA 3609 0.4134 MNSEKNVKATIVTQVSIGGFGNEVKAKDLVAYLEDKIGMVDRCRFEKLSWTPPESYPEFHIIDTARVPRTEDYQKVEAHAFVHFAMPKYVTDALNAAGCLDLILNNVPLKVSRGPENPFSLNQRRRTSTPFKLSDVVVEIGTLVSPEEFLVAWRGPDKGVSFLVDPFDSTCKLCFNRDIAFSFKGKERKAVIKCDFQVGFLVRDINDIKQYKDSFYHVVLLHLASSPWVWYRTADDDIEDLVSCDLLDDDDPWIRTTDFTPSGAVGRCNFYRISIPPRHGLKLMKAMDYLKGQRVQDIPLRRPLKVIDELDFGVPMSDPFFCIHSQKDITFDIIFLVNAILHKGIINQHRLSDGFYELLRNQPKEVNVAALKHICSYKRPVFDAAKRLKQVQEWLLRNPKLYQTSKQLDDVAQVRRLVITPTKAYCVPPEVELSNRVLRKYKEFSDRFLRVTFMDEGMQTINVNALNYYVAPIVREITSNSFPQKTNIYRRVKHILEEGFHLCGRKYSFLAFSSNQLRDRSAWFFAEERKLSCTDIRNWMGKFNQRNIAKCAARMGLCFSSTYATVEVAGKEVNSTLPDIERNNFVFSDGIGIITPDLAMEVAEKLKLEIVPSAFQIRYAGFKGVVASWPDKGDGCRLSLRPSMEKFTSNHTTLEICQWTRFQPGFLNRQIIVLLSALDVSDEIFWTMQEAMISRLNQMLVDIDVAFDVLTKSCAEHGNAAAIMLSCGFTPQKEPHLKGMLTSIRAAQLWGLREKSRIFVSSGRWLMGVLDESGVLEYGQCFIQVSNPSIENCFSKHGSRFTETKNLQVVKGFVVIAKNPCLHPGDIRVLEAVDAPGLHHLYDCLVFPQKGERPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWTPMQYDAQESKQQTRQVTTRDIIDFFVRNMVNEHLGAICNAHVVHADGSKYGALDENCIKLAELAATAVDFPKTGKIVTMPNNLKPKLYPDFMGKEVHQSYDSKKILGRLYRRIKDAYDEDINEADLNHGTDDIPYDTDLEVPGSADFIADAWQQKCSYDGQLSGLLGQYKVKREEEIVTGQIWSMPKYNSRKQGELKERLKHSYSSLKKEFRQTFERLNSDAGELSDEEKNLLYEQKASAWYQVTYHPKWVQKSLDIQYKSSENQEPGSSENMVMLSFPWIAVDYLARTKIRSRGSGKLDSTKPVDSLAKYLSERL* 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2613 1202 Pfam RNA dependent RNA polymerase 419 999 IPR007855 GO:0003968
Aev08g2613 1202 Coils Coil 1094 1114 - -
Aev08g2613 1202 PANTHER RNA-DEPENDENT RNA POLYMERASE 8 1201 IPR007855 GO:0003968
Aev08g2613 1202 PANTHER RNA-DEPENDENT RNA POLYMERASE 6 8 1201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2613 Aev-Chr8 24626187 24630236 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2613 K11699 - gmx:100795178 2018.43