Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2610 ATGCAAATCTGTAGATATGTTCCATCTTGGCTCTGTCAGATTTTCGCTTATATGGGAGGTTGTCTTGGATGCATCACAAAAATTCCAGCAATTATTTCAATGGACGAGGCATCAGTAGGACTAAGAACTCAAGGCCAAGCAGTAGCAAAAGACAACAGATCAGAGGATTTCTGGACCAGCAGTGCTTTTGAAATCGATCAATGTGCAGCTCTGTCCAGAAGTGTCTCATCAATTGGCATTCCAAACCATCCTTCTGATCCACAAAGTAGTGCTGGCATTCAAACTGATGATCCTCCTGAATTCGTCAATCACGGTCTTGTTCTCTGGAACCAGATAAGGCAACAATGGGTTGGAAATAATACGCGTCAGAGACAGACTCAAGTTAGAGAACCCAGAATAAGTTGGAATGCAACCTATGAGAGTCTCCTTGGAACCAACAAGCCTTTCCCCCAACGAATTCCTCTAGATGAAATGGTTGACTTTCTTGTTGACATTTGGGAGCTAGAGGGTCTGGTTCTTCCATTCTTCTCCTTCTTCTTCTCTTCATCCTCTCATGCTTCTCTGCCCCCTTCAGCAAAACGTCGCCGTTTCTGTTGCAGCTTCCTTCTTTTTCCTCCTCGCCTTCTTTTTTGCTCTCTTCGGAGGGTTCTTTTGTGGAGAACAGTGTGGATTTCACCTCCCGGGGTTTTTCCAGCTGTGCCCATGTCTCAAGTTTTCGGCTTTACCGGTGACAATTTTTGCCCTGGGGGGTCAGTGTATGCGAACCCCAAGGATGCAGGCCTCTTCTTGTCTCTCGGTCGTTCAGTTGACTTTTACTATCCTCTTCAGAAGAGGTCTCGCATCAGCGTTCCGTTCGACTTCAGTGGAGATTGGTTTGAGCAGAAGCAGAAGACATCTATTGAAGCCTTGCCAGATGAATGCCTCTTTGAGATCCTTAGAAGGTTGCCTGCTGGCCAAGACAGGAGCACATGCGCTACTGTGTCCAAGCGCTGGCTTATGCTTCTAAGCAATATTTCCAAGAATGAAATCTGCAGTGATGAAAGTGCTGGAAATAAAAATGAGTCCAGTGACAAGGAGGGTGATGATCAGGAATTCGGTGATGAAGGATACCTCTCCCGTAGCTTGGAAGGAAAGAAGGCAACTGATATTAGACTTGCTGCTATCGCTGTGGGGACATCATATCGCGGAGGATTGGGGAAGCTTTCAATTCGCGGAAGCAATTCAGACCGCGGGGTGACTGATCAAGGACTCAAGGCAGTTGCTCGCGGATGCCCTTCCCTGAAGGCTTTCTCTCTCTTGGATGTTGCTACTGTTGGGGATGAAGGCCTTATTGAGATTGCTGGTGGGTGTCACAAGTTAGAGAAGCTTGACCTTTGCAAGTGCCCCACAATTTCTGACAAGGCTTTGATGGAAGTTGCAAAGAACTGCCCAAATTTGACTGATTTATCAATAGAATCATGTCCTAAAATTGGTAATGATGGTCTACAGGCTATTGGAAAGTTGTGTCCCAATCTAAGGTCTATTTCAATCAAGGGTTGCACAGGAGTTGGTGATCAGGGCATTGCTGGCTTGTTATCTTCAGCTTCTTCATCTCTGACAAAGGTGAAGCTTGAGTCGCTGACTGTTTCCGATCTGTCTCTAGCAGTTATTGGGCACTACGGCTTTTCAGTTACTGATCTTGTCCTTAACTGCCTCCCAAATGTCAGCGAGAAGGGTTTCTGGGTTATGGGTAATGGTCGTGGACTGCAGAAGCTTACATCAGTCACAGTTGGATCCTGCCGAGGGGTAACAGATACTGGGCTTGAAGCTATTGGAAAGGGTTGTCCAAATGTGAAAAACTTCCAGCTTAGCAAGTGTGCATTTCTGTCAGATAATGGATTGGTTTCATTGACCAAGGCTGCTGCATCAATTGAGAGCCTACAATTGGAAGAGTGCCACAGAATTACCCAATTTGGGTTTTTTGGTGTCCTTTTCAACTGTGGTACAAAATTGAAGGTTCTTACTTTGGTTAGCTGCTATGGAATCAAAGATCTGAACTTGGGATTGCCAGCTGTATCTCCTTGTGAATCACTTTCCTCGTTAGCAATCCGTGACTGTCCTGGATTTGGAAATGCTACCCTTGCTGTGCTGGGGAAGCTATGTCCCCGTCTTCAGAATCTTGAATTGAGTGGACTTGCTGGTATAACAGATGCAGGGTTTCTTCCACTGCTTGAGAGCTGTGAGGCCGGTCTGGTTAAAGTCAATCTCAGTGGTTGCATCAATCTTACAGACAAAGTAGGTTTGTCCTTGGCCCATGTGCATGGATGGACTCTTGAGGTGCTCAACCTTGATGGTTGCAAAAGAATCAGTGATGCTAGCTTAAAGGCAATTGCAGGCAATTGCCCACTGCTCTCTGATCTCGATGTTTCCAAATGTACCATCACTGATGCCGGGATTGCAGCCCTCGCACGCGGGAAGCAGCTCAACTTGGAGATTCTTTCCATGGCAGGCTGCTCTTTGGTTTCGGAGAAGAGCCTGCCCGCATTGAGAAAGTTGGGCCAAAGCCTTGTGGGATTAAACATTCAGCACTGCAGCGCAATCAGCAGCCGTTCAGCTGGCATGCTTATGGAGAATCTCTGGAGGTGTGACATCCTCTATTGA 2640 0.4659 MQICRYVPSWLCQIFAYMGGCLGCITKIPAIISMDEASVGLRTQGQAVAKDNRSEDFWTSSAFEIDQCAALSRSVSSIGIPNHPSDPQSSAGIQTDDPPEFVNHGLVLWNQIRQQWVGNNTRQRQTQVREPRISWNATYESLLGTNKPFPQRIPLDEMVDFLVDIWELEGLVLPFFSFFFSSSSHASLPPSAKRRRFCCSFLLFPPRLLFCSLRRVLLWRTVWISPPGVFPAVPMSQVFGFTGDNFCPGGSVYANPKDAGLFLSLGRSVDFYYPLQKRSRISVPFDFSGDWFEQKQKTSIEALPDECLFEILRRLPAGQDRSTCATVSKRWLMLLSNISKNEICSDESAGNKNESSDKEGDDQEFGDEGYLSRSLEGKKATDIRLAAIAVGTSYRGGLGKLSIRGSNSDRGVTDQGLKAVARGCPSLKAFSLLDVATVGDEGLIEIAGGCHKLEKLDLCKCPTISDKALMEVAKNCPNLTDLSIESCPKIGNDGLQAIGKLCPNLRSISIKGCTGVGDQGIAGLLSSASSSLTKVKLESLTVSDLSLAVIGHYGFSVTDLVLNCLPNVSEKGFWVMGNGRGLQKLTSVTVGSCRGVTDTGLEAIGKGCPNVKNFQLSKCAFLSDNGLVSLTKAAASIESLQLEECHRITQFGFFGVLFNCGTKLKVLTLVSCYGIKDLNLGLPAVSPCESLSSLAIRDCPGFGNATLAVLGKLCPRLQNLELSGLAGITDAGFLPLLESCEAGLVKVNLSGCINLTDKVGLSLAHVHGWTLEVLNLDGCKRISDASLKAIAGNCPLLSDLDVSKCTITDAGIAALARGKQLNLEILSMAGCSLVSEKSLPALRKLGQSLVGLNIQHCSAISSRSAGMLMENLWRCDILY* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2610 879 SUPERFAMILY RNI-like 583 875 - -
Aev08g2610 879 Gene3D - 293 349 - -
Aev08g2610 879 PANTHER UNCHARACTERIZED 249 870 - -
Aev08g2610 879 SUPERFAMILY F-box domain 296 336 IPR036047 GO:0005515
Aev08g2610 879 MobiDBLite consensus disorder prediction 346 367 - -
Aev08g2610 879 PANTHER EIN3-BINDING F-BOX-LIKE PROTEIN 249 870 - -
Aev08g2610 879 Gene3D Ribonuclease Inhibitor 490 680 IPR032675 -
Aev08g2610 879 Gene3D Ribonuclease Inhibitor 373 489 IPR032675 -
Aev08g2610 879 Pfam F-box-like 300 334 IPR001810 GO:0005515
Aev08g2610 879 MobiDBLite consensus disorder prediction 351 367 - -
Aev08g2610 879 SMART LRR_CC_2 476 501 IPR006553 -
Aev08g2610 879 SMART LRR_CC_2 450 475 IPR006553 -
Aev08g2610 879 SMART LRR_CC_2 608 633 IPR006553 -
Aev08g2610 879 SMART LRR_CC_2 794 818 IPR006553 -
Aev08g2610 879 SMART LRR_CC_2 502 527 IPR006553 -
Aev08g2610 879 SMART LRR_CC_2 688 713 IPR006553 -
Aev08g2610 879 SMART LRR_CC_2 714 739 IPR006553 -
Aev08g2610 879 SMART LRR_CC_2 582 607 IPR006553 -
Aev08g2610 879 SMART LRR_CC_2 820 845 IPR006553 -
Aev08g2610 879 SMART LRR_CC_2 424 449 IPR006553 -
Aev08g2610 879 SMART LRR_CC_2 741 766 IPR006553 -
Aev08g2610 879 SMART LRR_CC_2 768 793 IPR006553 -
Aev08g2610 879 SMART LRR_CC_2 634 659 IPR006553 -
Aev08g2610 879 Pfam Protein of unknown function (DUF4050) 63 131 IPR025124 -
Aev08g2610 879 Pfam Protein of unknown function (DUF4050) 132 170 IPR025124 -
Aev08g2610 879 SMART fbox_2 303 344 IPR001810 GO:0005515
Aev08g2610 879 Gene3D Ribonuclease Inhibitor 681 878 IPR032675 -
Aev08g2610 879 SUPERFAMILY RNI-like 410 652 - -
Aev08g2610 879 Pfam Leucine Rich repeat 794 816 IPR001611 GO:0005515
Aev08g2610 879 Pfam Leucine Rich repeat 770 791 IPR001611 GO:0005515
Aev08g2610 879 Pfam Leucine Rich repeat 475 498 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2610 Aev-Chr8 24588814 24604433 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2610 K14515 - gmx:100805418 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2610 08 24588814 24604433 Aev08g2610 08 24588814 24604433 ECH