Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2598 ATGGCACAGAGCACGCTGATGTTGGAGGACTACGATTTCCCCTCTCTCGATGCACCTTCTTCTCCTTCTCGATCTCTGAGCGCGCACTTCTCTTCGCTGATGATCGACGTCAGTAACAAGCGCAACATCGTTTCCAGCAGGAGCTTTTCTTACAACAGGCTTCTCTCCAATCCGCTCAGGCTCTCCGTCCTCAAATTGGACGGATCTTGCTTCGATGTAGAAGTTGCAAAGACGGCGACTGTTGCTGAACTCAAGCACGCTGTGGAGGCTGTTTTTAGTCACATGCCTCAGAAAGGACCAGGGAAAATATCATGGGCACATGTTTGGGGTCAGTTCTGCTTATGCTTTGAAGGAAAGAAGCTTGTGACTGAAACAGATTATGTTAGAGATTATGGCATCAAGGATGGTGACCAGCTTCGTTTCATACGCCATGTATCTAACAATTGCAGTGTTCAAAAAAGGAAGATGAGGAAAAGAGTTATCAGCTCGAAACAACACAGGAGGTGCAGGTCATCACCACTAGTGAATAGATATCAACAGAAACAACTTTGTGGAGATGAGGACATTGGTTTGGATGATATAGCGATAGAGAATGGGAAGATCCAGCGATACAATGAAAAAGAAGATCGCGTTGGCAGGAGCAGAATAACTGGATTTTTGGGAGTTTTAGGAAAATTAGAAGGACTTTATGCTCTTGCAGGAGGCGACACTACTCCCGGAGATCTTTCAACCATGCTTTGGTTCTGCCAGTGGTTGAGACTTGAGACAGACATGCATAGGCCTAGTCTCATATCAGTAATGCTCATTTCATATGCAAACATCAATGAGAACTATGTTGCAGTGAAAGCAGCCATGGCCAACGTGATAATGGCTTCCTCCTCCAAATCCCTGATCCGACTCTCCACCAGTACCCCTCCCCCAACACCCTCTCCCAGACTCCCCAGAATCCCATTCCTCAAACTCCACTCCCTCCCAAAGCCCCAACAAGTCCTATCGTCCACCACATTCAAATCCCTCTCCGTCCTCGCAGCCACCTCCCTCGCCCTGGCCCCTCCCTCCCTCGCCGAGGAGTTTGAGAAAGCCGCCCTCTTCGACTTCAACCTCACCCTCCCAATCATCATGGCCGAGTTCCTCCTCCTCATGTTTGCGCTCGACAAGGTCTACTTCACCCCTCTCGGCAAGTTCATGGACGAGAGGGACGCCGCCATCAGGGAGAAGCTCAACAGCGTCAAGGACACCTCCGAGGAGGTGAAGCAGCTTGAGGAGCAGGCCACCGCCATCATGAAGGCCGCCAGAGCTGAGATATCGGCGGCACTGAACCAGATGAAGAAGGAGACTCAGGCGGAGGTGGAGCAGAAGATCGCTGAGGGGAGGAAGAAGGTGGAGGCGGAGCTGCAGGAGGCTCTTGCTAACTTGGAGAAGCAGAAGGATGAGACCATTAAGTCCCTTGACTCCCAGATTACCGCTCTTAGCCAGGAAATTGTCAAGAAGGTTCTTCCCACTGCTTAG 1509 0.5056 MAQSTLMLEDYDFPSLDAPSSPSRSLSAHFSSLMIDVSNKRNIVSSRSFSYNRLLSNPLRLSVLKLDGSCFDVEVAKTATVAELKHAVEAVFSHMPQKGPGKISWAHVWGQFCLCFEGKKLVTETDYVRDYGIKDGDQLRFIRHVSNNCSVQKRKMRKRVISSKQHRRCRSSPLVNRYQQKQLCGDEDIGLDDIAIENGKIQRYNEKEDRVGRSRITGFLGVLGKLEGLYALAGGDTTPGDLSTMLWFCQWLRLETDMHRPSLISVMLISYANINENYVAVKAAMANVIMASSSKSLIRLSTSTPPPTPSPRLPRIPFLKLHSLPKPQQVLSSTTFKSLSVLAATSLALAPPSLAEEFEKAALFDFNLTLPIIMAEFLLLMFALDKVYFTPLGKFMDERDAAIREKLNSVKDTSEEVKQLEEQATAIMKAARAEISAALNQMKKETQAEVEQKIAEGRKKVEAELQEALANLEKQKDETIKSLDSQITALSQEIVKKVLPTA* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2598 502 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 18 450 IPR039690 GO:0000398|GO:0005689
Aev08g2598 502 SUPERFAMILY Ubiquitin-like 56 149 IPR029071 -
Aev08g2598 502 Pfam ATP synthase B/B' CF(0) 370 499 IPR002146 GO:0015078|GO:0015986|GO:0045263
Aev08g2598 502 Coils Coil 403 482 - -
Aev08g2598 502 Gene3D - 54 153 - -
Aev08g2598 502 PANTHER UBIQUITIN-LIKE SUPERFAMILY PROTEIN 18 450 - -
Aev08g2598 502 Pfam Ubiquitin-like domain 59 145 IPR040610 -
Aev08g2598 502 Hamap ATP synthase subunit b [atpF]. 364 501 IPR002146 GO:0015078|GO:0015986|GO:0045263
Aev08g2598 502 CDD ATP-synt_Fo_b 369 499 - -
Aev08g2598 502 CDD Ubl_SNRNP25 59 144 IPR040610 -
Aev08g2598 502 Hamap ATP synthase subunit b' [atpF2]. 363 500 IPR034679 GO:0015078|GO:0015986|GO:0045263
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2598 Aev-Chr8 24523048 24526511 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2598 K02109 - pvu:PHAVU_009G092400g 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2598 08 24523048 24526511 Aev08g2598 08 24523048 24526511 ECH
Aev07g1173 07 9998208 10016807 Aev08g2598 08 24523048 24526511 ECH
Aev07g1173 07 9998208 10016807 Aev08g2598 08 24523048 24526511 PCT