Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2583 ATGGCCTCCAACCCAAAACTCCAAGCCACCATTTTGGTCCTTTCTCTCCTAGCTTATTCCACATTCACCACCCAAGCTTGTGCCCCTCCAAAACCAGCACCAGCACCCAAAAAGGTAACACCACCAACACCAAAACCAGCCCCAGCACCAAAAAAGGCAACACCACCACCAACACCAAAGGCAACACCTCCACCAACAACACCATGTCCTCCAAGTGCAACACCACCACCACCAAAAGAGACATGTCCTAAGGACACATTGAAGTTAGGGGCATGTGCTGACCTTTTAGGACTTGTTAACATTATTGTAGGGACACCTCCTTCAAGCAAGTGTTGTGCTTTGATTCAAGGTTTGGCTGATTTGGAGGCTGCCCTTTGCCTTTGTACCGCAATTAAGGCCAATGTGCTTGGAATTAACTTGAATGTTCCTGTTACTCTCAGTGTCATTCTTAGTGCTTGTCAAAAAACTGTTCCACCTGGTTTCCAATGTCCTTGA 495 0.4707 MASNPKLQATILVLSLLAYSTFTTQACAPPKPAPAPKKVTPPTPKPAPAPKKATPPPTPKATPPPTTPCPPSATPPPPKETCPKDTLKLGACADLLGLVNIIVGTPPSSKCCALIQGLADLEAALCLCTAIKANVLGINLNVPVTLSVILSACQKTVPPGFQCP* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2583 164 CDD HPS_like 81 163 IPR027923 -
Aev08g2583 164 Gene3D - 79 164 IPR036312 -
Aev08g2583 164 PANTHER LIPID TRANSFER PROTEIN 1 164 - -
Aev08g2583 164 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 85 164 IPR036312 -
Aev08g2583 164 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Aev08g2583 164 MobiDBLite consensus disorder prediction 29 81 - -
Aev08g2583 164 PANTHER - 1 164 - -
Aev08g2583 164 SMART aai_6 82 163 IPR016140 -
Aev08g2583 164 MobiDBLite consensus disorder prediction 27 81 - -
Aev08g2583 164 Pfam Hydrophobic seed protein 81 164 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2583 Aev-Chr8 24452050 24452544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2583 74 164 Acyl Lipid Metabolism Gene Families AT4G22490 37.634 2.66e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2583 - - gmx:100526941 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2583 08 24452050 24452544 Aev08g2583 08 24452050 24452544 ECH
Aev07g1120 07 9048206 9048571 Aev08g2583 08 24452050 24452544 PCT