Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2575 ATGGGTACCCTTACCCTTCTCAAATGCTACAGACCCTTGTTCCTCTCTTCGCTTCCTCACTCTGCTCGACCAATTCTTCTCTCTCGTTCCCCAATCTTCCGCACCAACCCCAACAACCCCTCCTTCTTCTGCCATTGCAGCTCTCTCCGCCAATCTCAGCCGTTGACGGACGACAAGAAGGAGAGTCCCGCCGAACCGGACGCCCATCATCACAAGGCTCCTTTCCCGGAGCTGTGGCTGCACAACACAATGAGCAAGAAGAAGGAGCTTCTGAAACCCAAAGTGGAATCCATTGTGAAAATGTACGTTTGCGGCGTAACAGCTTATGACCTCAGCCATATGGGGCACGCGCGCGTTTACGTCAATTTCGACCTTCTCTACAGATATCTTAAGCATTTGGGATATGAAGTCTGTTATGTTCGCAATTTTACTGATGTAGATGACAAGATCATTAAAAGAGCAAACGAGTTAGGAGAAGATCCGATCAGTTTGAGCCGGCGCTATTGTGAAGTGTTCCGTGATGACATGGTAGCTCTTAACTGTTTGCCTCCTTCCGTGGAACCAAAAGTCTCGGAGCACATCCCCCAAATCATTGATATGATTGAGAAGATTCTGAATAATGGCTATGCCTACGTTGTTGATGGAGATGTATACTTTATTGTAGAAAAATTTCCAGACTATGGAAAATTATCTGATCGAGATCCAGAAGGTAATCGAGCAGGTGAGAGGGTTGCTATTGATCCAAGGAAGAAAAATCCTGCTGATTTCGCTCTTTGGAAGTCAGTGAAGCCGGGAGAGCCATTTTGGGAGAGTCCCTGGGGACCTGGAAGACCCGGGTGGCATATTGAATGCAGTGCTATGAGTGCTACTCATCTTGGTTACACTTTTGACATCCATGGTGGAGGGGATGACCTTAAGTTTCCCCACCATGAAAATGAAATAGCTCAGAGTTGTGCTGCATGTAGTAAAAGTGATATAAGCCTTTGGATGCACAATGGCATTCTCACTGTTGACGGTCACAAGATGTCTAAATCTGTGGGAAACTTCGTCACAATACAGCAGGTGTTAGAAGACTACCATCCTCTGGCTTTGAGATACTTTTTGATGGTTGCCCATTATCGATCCCCACTTGACTATGCCCTTTCTAATGTACAGCTTGAAAGCGCTTCTGACCGTCTTTTCTATATTTATGAGACATTACATGAATGTGAAAGCTTTCTGAATCAGCATGATCAGACCATTGGGAAGGATGCCATCCCACCAGAAACTATTAACATTATTGATAACTTCCATAACGTTTTTCGGACCTCAATGTCCGATGATCTTCATACTCCAGTTGTTTTGTCTGGACTGTCTGACCCATTGAAATCAATCAATGATTTGCTGCATACTCGTCAGGGGAAAAAACAAAAATTTCGAATAGAATCACTCGCAGCTTTGGAGAAGAGCATCAGGAATGTCCTGACTGTCTTAGGACTTTTGCCTATAAGTTATTCTGAGATTTTGCAGCAGCTTAGGGAAAAAGCTTTGAAGCGTGCAAACTTGACAGAAGCTGAAGTCTTGGAGAAAATCGAAGAGCGGGCCACTGCTAGAATACAAAAGGAGTATGCTAAGTCTGATGCAATAAGAAAGGATTTGGCTGTTGTTGGTATTACTCTAATGGACAGTCCGACCGGCACAACTTGGCGACCGGCCATTCCTCTTCGGCTACAAGAGCAACAGATCAATGCACCTTAA 1737 0.4485 MGTLTLLKCYRPLFLSSLPHSARPILLSRSPIFRTNPNNPSFFCHCSSLRQSQPLTDDKKESPAEPDAHHHKAPFPELWLHNTMSKKKELLKPKVESIVKMYVCGVTAYDLSHMGHARVYVNFDLLYRYLKHLGYEVCYVRNFTDVDDKIIKRANELGEDPISLSRRYCEVFRDDMVALNCLPPSVEPKVSEHIPQIIDMIEKILNNGYAYVVDGDVYFIVEKFPDYGKLSDRDPEGNRAGERVAIDPRKKNPADFALWKSVKPGEPFWESPWGPGRPGWHIECSAMSATHLGYTFDIHGGGDDLKFPHHENEIAQSCAACSKSDISLWMHNGILTVDGHKMSKSVGNFVTIQQVLEDYHPLALRYFLMVAHYRSPLDYALSNVQLESASDRLFYIYETLHECESFLNQHDQTIGKDAIPPETINIIDNFHNVFRTSMSDDLHTPVVLSGLSDPLKSINDLLHTRQGKKQKFRIESLAALEKSIRNVLTVLGLLPISYSEILQQLREKALKRANLTEAEVLEKIEERATARIQKEYAKSDAIRKDLAVVGITLMDSPTGTTWRPAIPLRLQEQQINAP* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2575 578 CDD CysRS_core 79 379 IPR032678 -
Aev08g2575 578 SUPERFAMILY Nucleotidylyl transferase 77 383 - -
Aev08g2575 578 PRINTS Cysteinyl-tRNA synthetase signature 137 146 IPR024909 -
Aev08g2575 578 PRINTS Cysteinyl-tRNA synthetase signature 101 112 IPR024909 -
Aev08g2575 578 PRINTS Cysteinyl-tRNA synthetase signature 266 284 IPR024909 -
Aev08g2575 578 PRINTS Cysteinyl-tRNA synthetase signature 297 318 IPR024909 -
Aev08g2575 578 TIGRFAM cysS: cysteine--tRNA ligase 79 563 IPR015803 GO:0004817|GO:0005524|GO:0006423
Aev08g2575 578 Gene3D - 383 564 - -
Aev08g2575 578 Hamap Cysteine--tRNA ligase [cysS]. 78 565 IPR015803 GO:0004817|GO:0005524|GO:0006423
Aev08g2575 578 PANTHER CYSTEINYL-TRNA SYNTHETASE 77 574 IPR024909 -
Aev08g2575 578 PANTHER CYSTEINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL 77 574 - -
Aev08g2575 578 Gene3D HUPs 60 380 IPR014729 -
Aev08g2575 578 Pfam tRNA synthetases class I (C) catalytic domain 94 385 IPR032678 -
Aev08g2575 578 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 418 563 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2575 Aev-Chr8 24390451 24394235 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2575 K01883 - gmx:100786700 896.73