Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2523 ATGTGGCGCCGGAGCTCCTTCTACCTCCGTATCTCCAAATTCCACCTCTCCACGGAGTTTCCGTCGCGGTTTGGGTTCTCCGGGAGGTCTTTCTCGTCGTCGGAGCGGAGCGGAAGCAAGAGATTCGCGGCGCTGTGGGGGAACGGCGACTACGGAAGATTAGGCCTTGGAAAATTGGATTCTCAGTGGAGTCCTGCTATCTGCCCTGCGTTTCGTGATAAAGCCCTCAAATCGATTGCTTGTGGCGGTGCTCATACACTCTTCTTAACAGACGATGGATGCGTTTATGCCACCGGTCTTAATGATTTCGGACAACTTGGTATATCAGATAGTAATAAACAGTACTTGGTGGAGCCAGTTCAGGTTTTTGGAGAGGAGAAGCAAATTGTGCACATCTCTGCTGGTTATAACCATTCCTCGGCGATAACAGTCGATGGAGAACTATATATGTGGGGAAAGAATACAAGTGGACAGCTGGGACTTGGAAAAAGGGCTCCAAACATTGTTCCTTTGCCAACTAAAGTGGAATATTTGGATGGAATCAAGATTAAAATGGCAGCTCTCGGGTCAGAACACTCGATGGCTATAAGTGATGGAGGAGAGGCCTTTAGTTGGGGGATGGGAGGGTCTGGTAGGCTTGGTCATGGTCATGAGTCGGGAGTTCTAGGATTCTTCAAAAGTTCCAGTGAGTATACTCCGAGGCTTATAAAGGATCTTGAGGGAATCAAGGTTAAATATGTAGCTGCTGGGTTGCTAAGTTCGGCTTGTACTGATGAAAATGGATCTGTTTATATATTTGGTGAAAGAGGGATTGGCAAATTGGGCCTGAAGAAGACGAGCAGTGCAACAAAACCATCCTTAATTAGTGACCTTCCATACTCAAGAGAAGTTGCTTGCGGTGGCTATCATACTTGTGTCCTGACAAATTCTGGTGAGCTTTATACTTGGGGATCAAATGAAAATGGCTGCCTTGGCATCAGCTCCTCAGATTCCATTCACGTGCCTGAAAGGGTTCAAGGGCCATTCTTGAAGTCTTCTGTTAACCAGGTTTCTTGTGGTTGGAAGCATACAGCAGCTATTTCTGAAGGAAGAGTCTTCACATGGGGCTGGGGAGGTTCGAATGGGACTTTCTCTGAAGTTGGACATTCTTCTGGTGGACAATTGGGCCAAGGAAGTGATGTGGACTGTATAAATCCTACAAAAGTTTGTTTTGGAGAAGAAGTGAAAGCATTGCAAGTTTCGTGTGGGTTCAATCATACAGGTGCTATACTTGAATATACATAA 1284 0.4618 MWRRSSFYLRISKFHLSTEFPSRFGFSGRSFSSSERSGSKRFAALWGNGDYGRLGLGKLDSQWSPAICPAFRDKALKSIACGGAHTLFLTDDGCVYATGLNDFGQLGISDSNKQYLVEPVQVFGEEKQIVHISAGYNHSSAITVDGELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLDGIKIKMAALGSEHSMAISDGGEAFSWGMGGSGRLGHGHESGVLGFFKSSSEYTPRLIKDLEGIKVKYVAAGLLSSACTDENGSVYIFGERGIGKLGLKKTSSATKPSLISDLPYSREVACGGYHTCVLTNSGELYTWGSNENGCLGISSSDSIHVPERVQGPFLKSSVNQVSCGWKHTAAISEGRVFTWGWGGSNGTFSEVGHSSGGQLGQGSDVDCINPTKVCFGEEVKALQVSCGFNHTGAILEYT* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2523 427 PANTHER OS11G0545800 PROTEIN 37 426 - -
Aev08g2523 427 Gene3D - 219 426 IPR009091 -
Aev08g2523 427 PRINTS Chromosome condensation regulator RCC1 signature 76 89 IPR000408 -
Aev08g2523 427 PRINTS Chromosome condensation regulator RCC1 signature 186 202 IPR000408 -
Aev08g2523 427 PRINTS Chromosome condensation regulator RCC1 signature 42 58 IPR000408 -
Aev08g2523 427 PRINTS Chromosome condensation regulator RCC1 signature 300 318 IPR000408 -
Aev08g2523 427 PRINTS Chromosome condensation regulator RCC1 signature 358 379 IPR000408 -
Aev08g2523 427 PRINTS Chromosome condensation regulator RCC1 signature 146 162 IPR000408 -
Aev08g2523 427 PRINTS Chromosome condensation regulator RCC1 signature 95 111 IPR000408 -
Aev08g2523 427 PRINTS Chromosome condensation regulator RCC1 signature 202 216 IPR000408 -
Aev08g2523 427 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 261 310 IPR000408 -
Aev08g2523 427 SUPERFAMILY RCC1/BLIP-II 45 424 IPR009091 -
Aev08g2523 427 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 146 199 IPR000408 -
Aev08g2523 427 Gene3D - 33 218 IPR009091 -
Aev08g2523 427 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 311 363 IPR000408 -
Aev08g2523 427 PANTHER UBIQUITIN-PROTEIN LIGASE E3A-RELATED 37 426 - -
Aev08g2523 427 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 363 426 IPR000408 -
Aev08g2523 427 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 41 92 IPR000408 -
Aev08g2523 427 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 200 260 IPR000408 -
Aev08g2523 427 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 93 145 IPR000408 -
Aev08g2523 427 Pfam Regulator of chromosome condensation (RCC1) repeat 145 196 IPR000408 -
Aev08g2523 427 Pfam Regulator of chromosome condensation (RCC1) repeat 200 250 IPR000408 -
Aev08g2523 427 Pfam Regulator of chromosome condensation (RCC1) repeat 46 89 IPR000408 -
Aev08g2523 427 Pfam Regulator of chromosome condensation (RCC1) repeat 260 307 IPR000408 -
Aev08g2523 427 Pfam Regulator of chromosome condensation (RCC1) repeat 381 423 IPR000408 -
Aev08g2523 427 Pfam Regulator of chromosome condensation (RCC1) repeat 310 360 IPR000408 -
Aev08g2523 427 Pfam Regulator of chromosome condensation (RCC1) repeat 92 142 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2523 Aev-Chr8 23971563 23975983 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2523 - - vun:114196144 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2523 08 23971563 23975983 Aev08g2523 08 23971563 23975983 ECH