Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2429 ATGACGACGACGACGACGAAGAGGAAGAGAGAAGAAGAAGAAGAAGAAGAAGGGCACAAGGTCATGGATATCGTGTGGCAAACCCCAGCCAATCCCCCACACCCTCACGACTACATCTTCCGAAACGGAATTCGATTTGTTAAACCATACTACTTCGAATTTATCGCTCATGTTAAAAATCGATGGGCAGGGAAAACCATTGTAGATTTGTTCGCTGAAGAGTTTAAGGGTCGACCTTATGAATATTATGTTAATGCAGTGAAATGTGGCAGGATTCAAGTTGATGGTGAGATGGTACCGGTTTCGTACATAGTTAAATCATCTCAAAAGATAAGCCATTTCTTACACAGGCATGAACCGCCTGTGATGGCTTGTGAGGTTCCAATTCTTCAAAAAGAATCCGATGTGCTGACTGTTTGTAAGCCGGCATCTGTACCTGTACATCCATGTGGTCAATATCGTAAGAATACTGTTGTTGGCATCCTTCAAGCAGAGCATGGGCTGGCACCCCTATTTCCGGTTCACCGACTAGATCGCCTTGTCTCGGGACTTCTCATTTTGGCCAGAAATGCTTCAAAAGCTGATATTTTTAGGCAGCAGATTGAAGCTGGCTTAGTCCAGAAACAGTATATAGCAAAAGTAGTAGGAGAATTCCCTGAGGATGAGCTAACTGTTGATGCCAATATTGACTACAATGCTCGTGAAGGAAGGAGCACAGCAGAGGTCAAAGATTCTGCAAAGGGGAAGGCTGCCTCTACGAAATTTACTCGGATCAGTTCCAATGGTACTCAAAGTATTGTTTTATGTGAACCAATCACTGGTCGCACTCACCAGATTCGTGTTCATTTACAGTATACAGGACACCCAATAGCGAATGACATGCTGTACATATCAGAACAAAATGTTGATCGATCAAGTAAAGGTTCAAGTGCCGATAGATCAGCTCGAATAACTAATGCTTCTCTAACATCAAGTTTTGATGAAAAATTAGTCAACGGATGTGAAGAAATTTCCAATGAGGATTTTAGCATAGATCCCATGTGTACAAACTGTCCAAATTTGGCACCGAAAGGCTATGATGTCGATGAAGAAGGTCTATGGCTACATTGTTTTCGGTACACTGGACCTGGATGGACCTACGAATGCCCATATCCTGATTGGGCCAAACTTACTTAG 1176 0.4286 MTTTTTKRKREEEEEEEGHKVMDIVWQTPANPPHPHDYIFRNGIRFVKPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVNAVKCGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMACEVPILQKESDVLTVCKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLILARNASKADIFRQQIEAGLVQKQYIAKVVGEFPEDELTVDANIDYNAREGRSTAEVKDSAKGKAASTKFTRISSNGTQSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYISEQNVDRSSKGSSADRSARITNASLTSSFDEKLVNGCEEISNEDFSIDPMCTNCPNLAPKGYDVDEEGLWLHCFRYTGPGWTYECPYPDWAKLT* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2429 391 TIGRFAM rluA_subfam: pseudouridine synthase, RluA family 61 306 IPR006225 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Aev08g2429 391 ProSitePatterns Rlu family of pseudouridine synthase signature. 174 188 IPR006224 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Aev08g2429 391 PANTHER PSEUDOURIDINE SYNTHASE 23 390 - -
Aev08g2429 391 SUPERFAMILY Pseudouridine synthase 128 388 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Aev08g2429 391 MobiDBLite consensus disorder prediction 1 20 - -
Aev08g2429 391 Pfam RNA pseudouridylate synthase 136 284 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Aev08g2429 391 CDD PseudoU_synth_ScRIB2 112 389 - -
Aev08g2429 391 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 23 390 - -
Aev08g2429 391 Gene3D Pseudouridine synthase 120 352 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2429 K15454 - gmx:100811500 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2429 08 23227359 23232237 Aev08g2429 08 23227359 23232237 ECH