Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2422 ATGGAACACACAAAAGACCCGAATTCGAATCTGGGTCGAACCGAAGACTCCGATTCGGAGCTCGAACTCTACACCATCCCAAGCTCTTCCAGATGGTTCGCGTGGGACGAAATCCACGATACAGAGAGAATAACTCTCAGGGAATTCTTCGATGGAAGCTCGATCTCACGCTCCCCCAAGATCTACAAGGAGTACAGAGACTTCATCATCAACAAGTTCAGGGAAGACCCTTCGAGGAAGCTCACGTTCACCGAGGTGAGGAAGTCCCTCGTCGGCGACGTCACGCTCCTCCGCAAGGTGTTCCTCGCGCTTGAGAGCTGGGGGCTTATCAACTATGGCGTCTCCACCGGTGGGGAGGAGGAAGAAGAAGAGGAGGCGGAGGAAGGGGAAGAGAGGTGGAGGATTAAGGTGGAGGAAGGTGCGCCCAATGGGATCCGAGTGGTGGCTACGCCTAACTCCTTGAAGCCGATTTCGGTGCCACGTGGCGCCAAGACGAGTAAGGATGCTGCTTCGGGTTCGGGTTCCGGGTCTGTAAAATTGCCGCCGCTGGCGTCGTACTCGGATGTTTACGGCGATTTGATGAAGCAGAAGGAGGTGAAGTGTGGCCTTTGCGGTGACAAAATTGATTCTGGACACTACCGAAGTACCAAGGATAATTTCACTATTTGTGCAAAATGTTTCAAAAATGGCAACTATGGGGAGAAAAGGTCTGCGGAGGATTTCACATTAACTGAGTCCAATGAAAATAGTGGCAAACAGGATGGAGCTCTCTGGACTGAGGGTGAAACTCTCGTCCTTTTAGAATCTGTTTTGAAGCATGGTGATGATTGGGAACTAGTTGCGCAAAGTATTCCAACCAAGACTAAACTTGATTGTATCTCGAAACTCATTGAGCTGCCTTTTGGGGAGCTCATGTTGGGCTCTGCTCATAGAAATGGTAGCAGTAATAGTGTTAATGGCTTCATGAACAATGCAAAGCAAGTTCAGCCATCGTCATCTGATCACCAAGAAACTTCAAAGACCCAGGATCAACAATCTCCTGAGCTTACAAAGGAAAATGAGCTGAATGGTGATGCTGTGAAGGAAAGTCCTTCGAAAAAACAGCGTGTTGCTGCTCTTTCAGATTCCAGCAGTTCACTGCTGAAGCAGGTGGGGCTTATGTCTGCTGTGGTTGATCCTCATATCACCGCTGCTGCAGCTGATGCTACTGTTACGGCACTTTGTGATGAGAACTTGTGTCCCAGGGAGATATTTGATGTTGGAGGAGGATCCCTTGGGGGTGAAGGTGTAGAGATGGATAGGTCAACTCAATCAGAAATCGATGACAGAGGTCAAAAGGATGGCATACCTTTGACACTGCGTATAAGAGCCGCCATCGGCACTGCTCTTGGAGCTGCGGCTGCTCGAGCAAAGTTGTTAGCAGACCAGGAAGACAGAGAGATTGAGCTTTTAGTAGCAACCATAATTGAAGCACAGATTAAGAAATTGGAGCACAAGGTTAAACATTTCGACGATCTGGAGCTGCTGATGGAAAAGGAACATGCCGAAATAGAGGAGCTTAAAGATTCTATCCTGACTGAACGGATTGATGTGTTGAGGAAGACGTTTCAATCTGGAGTCACCAGATGGAAAGATTATTCTTATGTAAAATCTTAG 1656 0.4819 MEHTKDPNSNLGRTEDSDSELELYTIPSSSRWFAWDEIHDTERITLREFFDGSSISRSPKIYKEYRDFIINKFREDPSRKLTFTEVRKSLVGDVTLLRKVFLALESWGLINYGVSTGGEEEEEEEAEEGEERWRIKVEEGAPNGIRVVATPNSLKPISVPRGAKTSKDAASGSGSGSVKLPPLASYSDVYGDLMKQKEVKCGLCGDKIDSGHYRSTKDNFTICAKCFKNGNYGEKRSAEDFTLTESNENSGKQDGALWTEGETLVLLESVLKHGDDWELVAQSIPTKTKLDCISKLIELPFGELMLGSAHRNGSSNSVNGFMNNAKQVQPSSSDHQETSKTQDQQSPELTKENELNGDAVKESPSKKQRVAALSDSSSSLLKQVGLMSAVVDPHITAAAADATVTALCDENLCPREIFDVGGGSLGGEGVEMDRSTQSEIDDRGQKDGIPLTLRIRAAIGTALGAAAARAKLLADQEDREIELLVATIIEAQIKKLEHKVKHFDDLELLMEKEHAEIEELKDSILTERIDVLRKTFQSGVTRWKDYSYVKS* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2422 551 MobiDBLite consensus disorder prediction 315 374 - -
Aev08g2422 551 Gene3D - 254 302 - -
Aev08g2422 551 MobiDBLite consensus disorder prediction 156 177 - -
Aev08g2422 551 SMART sant 254 302 IPR001005 -
Aev08g2422 551 Pfam SWIRM domain 27 112 IPR007526 GO:0005515
Aev08g2422 551 Gene3D - 30 116 IPR036388 -
Aev08g2422 551 ProSiteProfiles Myb-like domain profile. 258 292 IPR001005 -
Aev08g2422 551 MobiDBLite consensus disorder prediction 315 352 - -
Aev08g2422 551 PANTHER SWI/SNF COMPLEX-RELATED 22 542 - -
Aev08g2422 551 CDD SANT 258 295 IPR001005 -
Aev08g2422 551 SUPERFAMILY Homeodomain-like 255 305 IPR009057 -
Aev08g2422 551 Pfam SWIRM-associated region 1 461 536 IPR032451 -
Aev08g2422 551 ProSiteProfiles SANT domain profile. 258 304 IPR017884 -
Aev08g2422 551 PANTHER BRAHMA ASSOCIATED PROTEIN 155 KDA 22 542 - -
Aev08g2422 551 SUPERFAMILY Homeodomain-like 21 115 IPR009057 -
Aev08g2422 551 ProSiteProfiles SWIRM domain profile. 24 121 IPR007526 GO:0005515
Aev08g2422 551 Pfam Myb-like DNA-binding domain 258 296 IPR001005 -
Aev08g2422 551 Coils Coil 503 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2422 Aev-Chr8 23180713 23183839 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2422 K11649 - gmx:100800135 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2422 08 23180713 23183839 Aev08g2422 08 23180713 23183839 ECH