Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2393 ATGCTTCCCGAATGGATGATCGACATTCCAGAAAACCTCTCACAAGACTGGTTTGTGTTTGCTAGGCCTTCTGGAAAACGGTGCTTTGTGGTTTCGTGCAATGGCACGACGATAAGTCGTTTGAAGAACGGATCAATACTGCACCGTTTCCCCTCAGCGTTGCCGAACGGTTCGAGGAAGAAGGATGTATCAGGTCCTTCTCAGTCGTACTCCATTTTGGACTGCATCTTTCATGAGGTGGATCAGACCTACTATGTGATTGACATGGTTTGCTGGCGGGGCTACTCGCTGTACGATTGTGCCGCGGAGTTCAGGTTTTTCTGGTTGAACTCTAAGCTTGCGGAGACTGGTGCTTGTGACCCTCCTTCATATTATCACAAGTATAGGTTCAGTTTGGTACCGGTGTACAGCTGCGACCAGAGCGGTTTGTCTGCTGCTTATTCTGCGCCGGTGCCTTATGTCAAAGACGGCCTTCTGTTTTTTAACAAGCATGCACACTACCAGGCAGGAATTACACCTCTAGCATTGGTTTGGAAGGATGAGAACTGTAGTCAGTATGTCTTGGACACTGATAGTAAAGGACAGGTTCCAAACCAACAGCAGGTGGTTTTGGAGCTACAAGAAGATGGAAAGCTGGCTACCTCTGATGATCCACCTGTGGTATTTGGCTGTTTAGATGGAAATTTTATGCAACAGTCAGAGTTGCATTCAGGATATCTTGTACGGTTTGCTATTGGAGAGGGAGGACTTATTTTGGTGGATGGCAAGCTTGAGAAAGCTGATCTAAATTATCTTGGCAAGGCCCATCGGGCTCGTGCTTCTGCTGATAGTTTCTCAAAGGTTATGTTCCAATACACTGTTCGGCACTCTCCCTAA 876 0.4703 MLPEWMIDIPENLSQDWFVFARPSGKRCFVVSCNGTTISRLKNGSILHRFPSALPNGSRKKDVSGPSQSYSILDCIFHEVDQTYYVIDMVCWRGYSLYDCAAEFRFFWLNSKLAETGACDPPSYYHKYRFSLVPVYSCDQSGLSAAYSAPVPYVKDGLLFFNKHAHYQAGITPLALVWKDENCSQYVLDTDSKGQVPNQQQVVLELQEDGKLATSDDPPVVFGCLDGNFMQQSELHSGYLVRFAIGEGGLILVDGKLEKADLNYLGKAHRARASADSFSKVMFQYTVRHSP* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2393 291 CDD Snurportin-1_C 1 181 - -
Aev08g2393 291 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 291 IPR017336 GO:0005634|GO:0005737|GO:0061015
Aev08g2393 291 Gene3D DNA ligase/mRNA capping enzyme 1 206 - -
Aev08g2393 291 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2393 Aev-Chr8 22963013 22965698 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2393 K13151 - gmx:100801927 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2393 08 22963013 22965698 Aev08g2393 08 22963013 22965698 ECH