Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev08g2390 | ATGGGTACTAGCATGGGAGAGTCTCCAAGGAGCCCAGAGGCAAAGCTTGGGATGAGAGTGGAAGATCTTTGGGATGTTCAGGAGCCACAGTTAAGTCCTAATGACAAGCTTAATGCTTGTTTTGAAAGCATCCCTGTCTCTGCTTTTCCTCCACCTCCTTCAAATCAAGATGTTGAGATAAAATCAGATGCAACTTTAGCTGAGGCTGTTAAGATACTGGCAGAGCATAACATTCTGAGTGCACCTGTGGTGGATGTTGATGCTCCTGAAGATGCTAGTTGGATTGACAGATACATTGGAATAGTTGAGTTTGCTGGAATTGTTGTCTGGATTCTGCACCAGTCTGATCCTACATCTCCTAAGAGTCCATCTAGTAGAACTGGTTTTGCAGCTGCATCAAATGGTTCTGCTTCTGATCTAAAATTTGATGACCAAAGCCTTGGATCTGCAGCAACAACTTCAGGGAACTTTTTTGAGGATCTAACTTCATCTGAACTTTACAAGAATACCAAGGTCCGCGACATTTCAGGGTCGTTCCGGTGGGCGCCGTTTCTGGCTTTGGAGAGTTCGAACTCATTTTTGACGATGCTGTTGCTGCTTTCTAAGTACAAGATGAAGAGTGTTCCTGTGGTAGACTTAGGTTCAGGCAAAATTGATAACATCATTACACAGTCTTCTGTGATTCACATGCTAGCAGAATGTGCTGGTCTTCACTGGTTTGAGAATTGGGGAACCAAGAAACTATCTGAAGTTGGTCTTCCCCTTGTAACACCAAATCATATCATCAAGGTTTATGAGGATGAACCAGTGCTTCAAGCATTTAAATTGATGAGGAAAAAGAGGATTGGAGGGGTTCCTGTAATCGAAAGGGGTGGTGGTAGCAAAGCAGTGGGTAATATAAGCCTGCAAGATGTTCATTTCTTGCTAACTGCTCCAGAAATCTACCATGATTATAGAGCTATTACAGTTAAACACTTCTTAACAGCAGTTAGAAGGTACATGGAGAAGAATGAGGGTGGTTTCCCAATGTCAAGAGGTTTGATTACATGCAAAAAGGACTGCACAATCAAAGAACTGATTCAGTTGCTTGACCATGAGAAGATTCATAGGGTCTATGTTGTGGATCATGATGGGAATCTTGAAGGGTTGATCACACTCAGAGATATCATCTCGAGGCTTGTACACGAGCCACGTGGCTATTTTGGCGACTTCTTCGACGGTGTTCTTCCTATGCCTCCGAACAGCAGGGTTTAA | 1254 | 0.4322 | MGTSMGESPRSPEAKLGMRVEDLWDVQEPQLSPNDKLNACFESIPVSAFPPPPSNQDVEIKSDATLAEAVKILAEHNILSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQSDPTSPKSPSSRTGFAAASNGSASDLKFDDQSLGSAATTSGNFFEDLTSSELYKNTKVRDISGSFRWAPFLALESSNSFLTMLLLLSKYKMKSVPVVDLGSGKIDNIITQSSVIHMLAECAGLHWFENWGTKKLSEVGLPLVTPNHIIKVYEDEPVLQAFKLMRKKRIGGVPVIERGGGSKAVGNISLQDVHFLLTAPEIYHDYRAITVKHFLTAVRRYMEKNEGGFPMSRGLITCKKDCTIKELIQLLDHEKIHRVYVVDHDGNLEGLITLRDIISRLVHEPRGYFGDFFDGVLPMPPNSRV* | 418 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev08g2390 | 417 | Gene3D | - | 244 | 396 | IPR046342 | - | |
| Aev08g2390 | 417 | SUPERFAMILY | CBS-domain pair | 30 | 232 | IPR046342 | - | |
| Aev08g2390 | 417 | SMART | cbs_1 | 260 | 310 | IPR000644 | - | |
| Aev08g2390 | 417 | SMART | cbs_1 | 56 | 112 | IPR000644 | - | |
| Aev08g2390 | 417 | SMART | cbs_1 | 183 | 232 | IPR000644 | - | |
| Aev08g2390 | 417 | SMART | cbs_1 | 346 | 394 | IPR000644 | - | |
| Aev08g2390 | 417 | SUPERFAMILY | CBS-domain pair | 242 | 403 | IPR046342 | - | |
| Aev08g2390 | 417 | CDD | CBS_pair_SF | 260 | 390 | - | - | |
| Aev08g2390 | 417 | Pfam | CBS domain | 261 | 305 | IPR000644 | - | |
| Aev08g2390 | 417 | Pfam | CBS domain | 343 | 394 | IPR000644 | - | |
| Aev08g2390 | 417 | Pfam | CBS domain | 59 | 103 | IPR000644 | - | |
| Aev08g2390 | 417 | PANTHER | BNAA06G16460D PROTEIN | 8 | 417 | - | - | |
| Aev08g2390 | 417 | ProSiteProfiles | CBS domain profile. | 53 | 118 | IPR000644 | - | |
| Aev08g2390 | 417 | CDD | CBS_pair_SF | 197 | 305 | - | - | |
| Aev08g2390 | 417 | CDD | CBS_pair_SF | 60 | 228 | - | - | |
| Aev08g2390 | 417 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 8 | 417 | - | - | |
| Aev08g2390 | 417 | Gene3D | - | 36 | 236 | IPR046342 | - | |
| Aev08g2390 | 417 | ProSiteProfiles | CBS domain profile. | 256 | 318 | IPR000644 | - | |
| Aev08g2390 | 417 | ProSiteProfiles | CBS domain profile. | 343 | 401 | IPR000644 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aev08g2390 | Aev-Chr8 | 22947175 | 22950743 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev08g2390 | - | - | gmx:100780629 | 701.434 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aev01g1899 | 01 | 23992799 | 23997025 | Aev08g2390 | 08 | 22947175 | 22950743 | PCT |