Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2365 ATGCTCAAATCAACCTTCACTCCCTTTTTCTCGGTGCTTGCTCCAAAACCCAAATCTCCAAAACTACTATTATCTCATGTATTCACCAACACCTTATTCACAAACAGCACTCCACCTGTTCGACAAAATGCCTCTGTCAAATACCAACCCATCACCTCCCCTTCTTCAGCATATGTTCACCTCCCATTCTGCAGAAAACGCTGCCACTACTGTGACTTCTCCATAGTCGCTCTTGGCTCCGCTTCAGCCCAGATAGACGACGACCCACGAGTCCTGAACTATATACAATGGCTCTGCAGAGAAATCAGTGCAACAAAAGTGGAACTTGGTGATGCCAAGACACCACTTGAAACTGTCTTCTTTGGTGGTGGAACACCCTCCCTTGTGCCCCCAAGGATGGTTTCTATGGTTTTGGAAGTTCTAAGGAGGAAATTTGGGTTGAGTGAGGATGTTGAAATATCGATGGAAATGGACCCGGGGACTTTTGATGCTGAGAAGATGAAGGAGATGATGATGTTGGGAGTGAATAGGGTGTCTTTGGGAGTTCAAGCATTTCAGGAGAAGCTTCTGAAGGCTTGTGGGAGGGCACATGGTTTGAGAGAGGTTCATGAGGCCATTGATATTGTGAAGCTGTGTGGGGTTGAGAATTGGAGTATTGATCTTATTGCTTCACTTCCTCATCAGACAAGTGATATGTGGGAGGAGAGCCTGAGGCTCACCATTGAGGCTCAACCAACTCATGTTTCTGTTTATGATTTGCAAATTGAGCAGGGGACAAAATTTGGAGCCTTGTATACACCAGGGGAATTTCCTCTGCCTTCTGAGAAACAATCAGCAGATTTCTATAAGATGGCTTCAAGAATGCTTTCAGATGCCAATTATAACCATTACGAAATCAGCAGCTACTGCAAGAGTGGATATGAGTGCAAGCACAACTTTACCTATTGGAAGAACAAGCCTTTCTACGGCTTCGGCCTTGGCTCTGCTAGTTTTGTTGGCGGACTGAGGTATTCGAGGCCAAAGAAAGTGAACGATTACACGAAGTTTGTCGAAAATTTGGAAAATGGATTAGTGAATAGCTCTGGTGAGGGCCATATTCATGGCAAGGACACTGCCATGGATGTGGTGATGCTGTCCCTAAGAACTGCAAGAGGGATAGACTTGAAGTGTTTCCAAGAATCATTTGGAAGCTCTATTGTTTTATCACTTCTTGAGGTTTATAAGCCTTATTTTGAGAGTGGACATGTGGTTTGTTTGGACAAGAAGAGGAGAACAATCAGAACAAATGACCTCAAAAATTGTCTAATGGATGAAACTAACACAGAAGAAGGGATGGCCTATATAAGGCTAAGTGATCCAGAAGGTTTCCTCTTATCAAATGAGCTGATATCCCTTGCTTTTGGGGTTATTGACTCTTACAAAGATTGCTCTCCCAACATGGAGATTATTTGA 1452 0.4373 MLKSTFTPFFSVLAPKPKSPKLLLSHVFTNTLFTNSTPPVRQNASVKYQPITSPSSAYVHLPFCRKRCHYCDFSIVALGSASAQIDDDPRVLNYIQWLCREISATKVELGDAKTPLETVFFGGGTPSLVPPRMVSMVLEVLRRKFGLSEDVEISMEMDPGTFDAEKMKEMMMLGVNRVSLGVQAFQEKLLKACGRAHGLREVHEAIDIVKLCGVENWSIDLIASLPHQTSDMWEESLRLTIEAQPTHVSVYDLQIEQGTKFGALYTPGEFPLPSEKQSADFYKMASRMLSDANYNHYEISSYCKSGYECKHNFTYWKNKPFYGFGLGSASFVGGLRYSRPKKVNDYTKFVENLENGLVNSSGEGHIHGKDTAMDVVMLSLRTARGIDLKCFQESFGSSIVLSLLEVYKPYFESGHVVCLDKKRRTIRTNDLKNCLMDETNTEEGMAYIRLSDPEGFLLSNELISLAFGVIDSYKDCSPNMEII* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2365 483 Gene3D tm_1862 like domain 62 291 IPR023404 -
Aev08g2365 483 SFLD HemN-like, clustered with heat shock genes 53 423 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Aev08g2365 483 SMART MiaB 54 284 IPR006638 GO:0003824|GO:0051536
Aev08g2365 483 TIGRFAM hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 56 414 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Aev08g2365 483 Pfam Radical SAM superfamily 59 239 IPR007197 GO:0003824|GO:0051536
Aev08g2365 483 ProSiteProfiles Radical SAM core domain profile. 46 292 IPR007197 GO:0003824|GO:0051536
Aev08g2365 483 SFLD anaerobic coproporphyrinogen-III oxidase like 53 423 - -
Aev08g2365 483 PANTHER RADICAL S-ADENOSYL METHIONINE DOMAIN-CONTAINING PROTEIN 1, MITOCHONDRIAL 38 469 - -
Aev08g2365 483 SUPERFAMILY Radical SAM enzymes 38 420 - -
Aev08g2365 483 CDD Radical_SAM 64 272 - -
Aev08g2365 483 PANTHER COPROPORPHYRINIGEN III OXIDASE 38 469 IPR034505 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2365 Aev-Chr8 22719054 22721097 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2365 - K07739 pvu:PHAVU_009G169000g 756.903