Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2353 ATGGCGGAGCCAATGGAACCAAAGCTTCAAATTGCTGCTGCAGCAGCAGCAGAAGCTTCCAAGTCCAAGAGTCTGAACCCTACGAAACTCGTCGTTTTAGCTGACCTCAACGTCGATCCCCCTGACGACGACGACACCACCACCACCACCAACGATTCTTCCCACCTCCCTCCTCCTCCTCCTCCACCACCGCCTCCACCTATCACCAGATTGGCAAGTGATGAAAGCAGTCAAGATAAGAGTTTGTTGTCCAAAGACAGTGATAGCATTGAAGGTGAAGGTAAAAAATTGAGCAAATTGGGGAAATGCCGATCCAGACTTAACAAGACAGATTCTTCTCTTGAATGTGGAGCTGATGCAGATGGTGATCAACATGTTCAAGGAACTCCTTCCTCTCGTGAGGAAAAAGTTAGCAGTATGAAAACTGGCTTGGTTCATGTTGCAAGGAAGATGCCCAAAAATGCTCATGCTCATTTTATTCTTGGCTTGATGTACCAAAGATTAAACCAACCTCAAAAGGCTATATTAGCTTATGAAAAGGCAGCTGAGATCCTACTCAAGCCTGAGACTGAGGTTGAAAGGCCAGAGTTGCTTTCATTAGTTCAGATTCACCATGCACAGTGCCTGATACTAGAAAGTTCATCAGAAAATAGTTCAGATAAAGAACTTGAACCTCACGAACTTGAGGAAATTCTTTCCAAACTGAAAGAGTCAGTGCAATCAGATATCAAACAGGCAGCCGTATGGAATACACTAGGTTTTATCCTCCTTAAAAGTGGTCGCGTCCAGAGTGCTATTGCAGTTTTGTCATCATTGTTGGCCACTTCACCAGAGAACTATGATTGCCTAGGAAATCTTGGGATAGCTTATCTTCAAACTGGGAATTTGGAATTATCTGCAAAATGTTTCCAAGAGTTGATCCTGAAAGATCAAAACCATCCTGCAGCTTTAGTCAACTATGCTACCTTCTTTTGTGTAAACATGCTTCAGTTGTGGCAGAAATTGATGATTAATGTAGGTGTTGGTGCAAGTGCTGCTGAAGGTGCTTTGGCAGATCAGGCTATGTCTGTTAATGTCGCTAAGGAATGTTTGTTAGCTGCTATTAAAGTGGATGGCAAATCAGCCCATATCTGGGCAAATCTTGCCAATGCATTTTCTATGAGTGGCAGCAAAACTGGAACCCAATTGCATGTCTACTCGATATGCTGTTGCTATTCATCGAGTGAAGGAGGCAGAAAGATCTCAAGATCCAGTGAACTGCATTCATGTGCTGGAAACGAGATGGCTTCTATAATAAGGGATGGCGATTCATCACTGGTTGAGCTTCCAATAGCATGGGCCGGGCTTGCTTTGGTTCACAAGTCTCAGAATGAGATAGCAGCAGGATATGAAAATGAACAGCATGAGTTGACGGAAGTTGAAGAGCGCACTGTTAGCAGTTTAAAACAGGCTATAGCAGAAGATCCAGATGATGCTGTGCAGTGGCTGCAACTTGGCCTTCATAGTCTTTGTGCTCGGCAATTCAAAACATCACAAAAGTACCTCAAAGCTGCTATTGCCTGCGACAAGGATTCCAGCTATGCGTGGTCTAACCTCGGTGTATCACTTCAACTATCAGATGATCCATCACAAGCTGAAGAAGTATTCAAAAAGGCTTTATCTTTGGCAACTACTCAACAAGCACATGCCATATTATCTAACTTGGGGATCCTCTACCGTTACCAGAAACAATACGAGCGCGCCAAGGCAATGCTCACAAAGTCACTTGAACTTCAGCCAGGCTATGCTCCTGCATTCAACAATCTTGGTCTTGTTTTTGTTGCTGAGGGTCTTTTGGAAGAGGCCAAGTATTGTTTTGAAAAAGCCCTCCAATCTGATCCCTTGCTTGATGCAGCCAAATCCAACTTGATTAAGGTTGTTTCCATGACAAAGTTATGTAGAGACCTATCTTCATGCCATGTTAAAGAATAA 1971 0.4358 MAEPMEPKLQIAAAAAAEASKSKSLNPTKLVVLADLNVDPPDDDDTTTTTNDSSHLPPPPPPPPPPPITRLASDESSQDKSLLSKDSDSIEGEGKKLSKLGKCRSRLNKTDSSLECGADADGDQHVQGTPSSREEKVSSMKTGLVHVARKMPKNAHAHFILGLMYQRLNQPQKAILAYEKAAEILLKPETEVERPELLSLVQIHHAQCLILESSSENSSDKELEPHELEEILSKLKESVQSDIKQAAVWNTLGFILLKSGRVQSAIAVLSSLLATSPENYDCLGNLGIAYLQTGNLELSAKCFQELILKDQNHPAALVNYATFFCVNMLQLWQKLMINVGVGASAAEGALADQAMSVNVAKECLLAAIKVDGKSAHIWANLANAFSMSGSKTGTQLHVYSICCCYSSSEGGRKISRSSELHSCAGNEMASIIRDGDSSLVELPIAWAGLALVHKSQNEIAAGYENEQHELTEVEERTVSSLKQAIAEDPDDAVQWLQLGLHSLCARQFKTSQKYLKAAIACDKDSSYAWSNLGVSLQLSDDPSQAEEVFKKALSLATTQQAHAILSNLGILYRYQKQYERAKAMLTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFEKALQSDPLLDAAKSNLIKVVSMTKLCRDLSSCHVKE* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2353 656 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 16 654 - -
Aev08g2353 656 Gene3D Tetratricopeptide repeat domain 142 205 IPR011990 GO:0005515
Aev08g2353 656 ProSiteProfiles TPR repeat profile. 596 629 IPR019734 GO:0005515
Aev08g2353 656 SUPERFAMILY TPR-like 480 627 IPR011990 GO:0005515
Aev08g2353 656 Gene3D Tetratricopeptide repeat domain 475 560 IPR011990 GO:0005515
Aev08g2353 656 MobiDBLite consensus disorder prediction 34 96 - -
Aev08g2353 656 Pfam Tetratricopeptide repeat 528 591 - -
Aev08g2353 656 SMART tpr_5 562 595 IPR019734 GO:0005515
Aev08g2353 656 SMART tpr_5 526 559 IPR019734 GO:0005515
Aev08g2353 656 SMART tpr_5 280 313 IPR019734 GO:0005515
Aev08g2353 656 SMART tpr_5 492 525 IPR019734 GO:0005515
Aev08g2353 656 SMART tpr_5 596 629 IPR019734 GO:0005515
Aev08g2353 656 SMART tpr_5 246 279 IPR019734 GO:0005515
Aev08g2353 656 SMART tpr_5 155 188 IPR019734 GO:0005515
Aev08g2353 656 ProSiteProfiles TPR repeat profile. 246 279 IPR019734 GO:0005515
Aev08g2353 656 MobiDBLite consensus disorder prediction 54 70 - -
Aev08g2353 656 Gene3D Tetratricopeptide repeat domain 561 649 IPR011990 GO:0005515
Aev08g2353 656 ProSiteProfiles TPR repeat profile. 526 559 IPR019734 GO:0005515
Aev08g2353 656 Pfam Tetratricopeptide repeat 155 184 IPR019734 GO:0005515
Aev08g2353 656 Pfam Tetratricopeptide repeat 596 627 IPR019734 GO:0005515
Aev08g2353 656 MobiDBLite consensus disorder prediction 111 138 - -
Aev08g2353 656 Gene3D Tetratricopeptide repeat domain 216 394 IPR011990 GO:0005515
Aev08g2353 656 ProSiteProfiles TPR repeat profile. 562 595 IPR019734 GO:0005515
Aev08g2353 656 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN 16 654 - -
Aev08g2353 656 Pfam Tetratricopeptide repeat 256 315 - -
Aev08g2353 656 MobiDBLite consensus disorder prediction 79 96 - -
Aev08g2353 656 SUPERFAMILY TPR-like 149 322 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2353 Aev-Chr8 22613935 22618853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2353 507 624 EF-hand Containing Proteins AT1G05150 31.092 6.44e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2353 - - adu:107478871 925.235