Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2226 ATGGCTTCCTCTGTTTCAAGGTTCATCAAGTGTGTCACTGTTGGGGATGGAGCTGTAGGCAAAACCTGCATGCTCATTTGCTACACTAGCAATAAATTCCCCACGGACTATATTCCAACAGTGTTTGATAATTTCAGTGCAAATGTTGTGGTTGAAGGCATCACTGTCAATTTAGGCCTCTGGGACACAGCTGGGCAAGAGGATTACAACAGGTTGAGGCCTTTGAGCTACAGGGGGGCAGATGTTTTTGTGTTGGCTTTTTCTTTGGTTAGTCGCGCGAGCTATGAGAATGTGTTGAAGAAGTGGATCCCTGAACTCCAGCATCATGCCCCCGGCATCCCGGTGGTACTGGTTGGCACCAAATTGGATCTCCGAGAAGACAAGCACTATTTGGCTGATCATCCGGGCCTGGTTCCTGTGACTGCTGAACAAGGCGAGGAACTCCGTAAACAGATTGGAGCTACCTATTATATTGAGTGCAGCTCAAAAACTCAGCAGAATGTGAAGGCAGTTTTTGATGCTGCAATCAGGATGGTGATCAAGCCTCCGCAGAAGCAGCATGAGAAGAAGAAGAAGAAGAAACAACCTCGAGGCTGTTTCCTAAATGTCCTCTGTGGAAGGAATATTGTTCGTGATAAGTGA 642 0.4704 MASSVSRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGITVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHHAPGIPVVLVGTKLDLREDKHYLADHPGLVPVTAEQGEELRKQIGATYYIECSSKTQQNVKAVFDAAIRMVIKPPQKQHEKKKKKKQPRGCFLNVLCGRNIVRDK* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2226 213 TIGRFAM small_GTP: small GTP-binding protein domain 9 173 IPR005225 GO:0005525
Aev08g2226 213 SMART ras_sub_4 6 182 - -
Aev08g2226 213 PRINTS Transforming protein P21 ras signature 9 30 - -
Aev08g2226 213 PRINTS Transforming protein P21 ras signature 49 71 - -
Aev08g2226 213 PRINTS Transforming protein P21 ras signature 111 124 - -
Aev08g2226 213 PRINTS Transforming protein P21 ras signature 157 179 - -
Aev08g2226 213 PRINTS Transforming protein P21 ras signature 32 48 - -
Aev08g2226 213 Pfam Ras family 10 180 IPR001806 GO:0003924|GO:0005525
Aev08g2226 213 SMART rab_sub_5 9 182 - -
Aev08g2226 213 SMART rho_sub_3 11 182 IPR001806 GO:0003924|GO:0005525
Aev08g2226 213 CDD Rop_like 8 180 - -
Aev08g2226 213 ProSiteProfiles small GTPase Rho family profile. 2 179 - -
Aev08g2226 213 PANTHER RHO FAMILY GTPASE 1 206 IPR003578 GO:0005525|GO:0007264
Aev08g2226 213 PANTHER - 1 206 - -
Aev08g2226 213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 179 IPR027417 -
Aev08g2226 213 Gene3D - 2 202 IPR027417 -
Aev08g2226 213 ProSiteProfiles small GTPase Rab1 family profile. 4 213 - -
Aev08g2226 213 ProSiteProfiles small GTPase Ras family profile. 4 204 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2226 Aev-Chr8 21433982 21438129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2226 9 197 EF-hand Containing Proteins AT5G27540 24.737 1.69e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2226 K04392 - gmx:100499774 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2042 01 25040025 25042518 Aev08g2226 08 21433982 21438129 PCT