Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2172 ATGGCGGCGAAGGAGGATAGCGAGCCGGTGATGGTGTCGCAGTTCGTGGTGGAGCTTCAGGGGCTGAAAACCGTTGATGGAGAGGAACCACCTAGGATATTTCACTTCAATCCGAGGTTGAAGGGTGATTGGAGCGGGAGGCCCGTGATCGAGATGAACACGTGTTACCGCATGCAGTGGGGCGCTGCGCTTAGATGTGACGGTTGGAAATCCAAGGCTGATGAAGATACCGTTGATAGGCAAGTGAAGTGTGAGAAGTGGATACGGGACGATGAAGATCACACAGAGGAGTCTAAGGCGACATGGTGGTTGAATAGACTCATAGGTCGCACCAAAAAAGTAACAGTTGATTGGCCATTCCCATTTTCTGAGGACAAGCTGTTTGTTCTTACTCTTAGCGCCGGTTTGGAGGGGTATCATGTTACCGTTGATGGAAGGCATGTGGCCTCTTTTCCGTATCGCACTGGCTATACTCTTGAGGATGCCACTGGGCTTTCTTTGGGTGGGGACATCGATGTGCACTCTGTATTTGCTGCCTCTTTGCCTTCAACACATCCTAGCTTTGCCCCACAGCGGCATCTTGAATTTTCCACCAGATGGCGTGCTCCACCACTTCCCGAATCCGGCGTAGAATTGTTCATTGGCGTCCTCTCAGCTGGAAACCATTTCGCCGAGCGAATGGCTGTGAGGAAGTCATGGATGCAGCATAGGCTAATCAAATCTGCAAAAGTCGTCGCTCGTTTCTTCGTCGCACTGAGCCCAAGAAAAGAAATTAATGCAGAGTTGAAGAAGGAGGCAGAATTTTTCGGCGATATTGTTATCGTGCCTTACCTGGATAACTATGACCTTGTTGTGTTGAAAACAGTGGCTATATGTGAATATGGGGTTCACACAGTTTCTGCTAAGTATATCATGAAGGGTGATGATGACACTTTCGTAAGAGTTGATGCTGTTATCAACGAAGCACGGAAGGTTCCAGATGATACAAGCTTTTATATTGGGAATATAAATTACTACCACAAACCCCTGCGCTACGGTAAATGGGCAGTAACGTACGAGGAGTGGCCGGAAGAGGACTATCCTCCCTATGCTAATGGACCGGGTTATATTTTGTCATCGGATATCGCACGCTACATTGTTTCCGAATTCGAGATGCATAAATTAAGGTTGTTTAAAATGGAAGATGTAAGTATGGGAATGTGGGTTGAGCAATTCAACAGCACAAAACCAGTAGTTTACAAGCATAGCTTAAAGTTCTGCCAATTTGGTTGCATAGAAGATTATTACACTGCTCATTACCAATCCCCAAGGCAAATGATATGCCTTTGGGACAAATTGCAAAGGAATACAAAGCCTCAATGTTGCAACATGAGATGA 1377 0.4648 MAAKEDSEPVMVSQFVVELQGLKTVDGEEPPRIFHFNPRLKGDWSGRPVIEMNTCYRMQWGAALRCDGWKSKADEDTVDRQVKCEKWIRDDEDHTEESKATWWLNRLIGRTKKVTVDWPFPFSEDKLFVLTLSAGLEGYHVTVDGRHVASFPYRTGYTLEDATGLSLGGDIDVHSVFAASLPSTHPSFAPQRHLEFSTRWRAPPLPESGVELFIGVLSAGNHFAERMAVRKSWMQHRLIKSAKVVARFFVALSPRKEINAELKKEAEFFGDIVIVPYLDNYDLVVLKTVAICEYGVHTVSAKYIMKGDDDTFVRVDAVINEARKVPDDTSFYIGNINYYHKPLRYGKWAVTYEEWPEEDYPPYANGPGYILSSDIARYIVSEFEMHKLRLFKMEDVSMGMWVEQFNSTKPVVYKHSLKFCQFGCIEDYYTAHYQSPRQMICLWDKLQRNTKPQCCNMR* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2172 458 Pfam Galactosyltransferase 225 405 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aev08g2172 458 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT5 18 458 - -
Aev08g2172 458 CDD GLECT 13 177 IPR001079 GO:0030246
Aev08g2172 458 Pfam Galactoside-binding lectin 11 177 IPR001079 GO:0030246
Aev08g2172 458 Gene3D - 206 454 - -
Aev08g2172 458 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 18 458 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aev08g2172 458 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 1 179 IPR001079 GO:0030246
Aev08g2172 458 Gene3D - 8 177 - -
Aev08g2172 458 SUPERFAMILY Concanavalin A-like lectins/glucanases 13 177 IPR013320 -
Aev08g2172 458 SMART Gal_bind_lectin_2 6 178 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2172 Aev-Chr8 20934612 20937935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2172 11 458 Glycosyltransferase AT1G74800 78.174 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2172 K20843 - gmx:100795908 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2073 01 25285923 25288904 Aev08g2172 08 20934612 20937935 PCT