Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1690 ATGGATAACAGTAACTGGGATCATACTCTGCAAGATGGAAAACTCTACAGGCACCTCAATTCCCTTATTGTTGCTCATCTTCGCGACAACAACCTCACTCAGGCTGCAAGTGCTGTTGCTTCAGCTACTATGACACCATTAAATGTGGAAGCCCCACCAAACAAGCTTCTTGAGCTGGTTGCTAAGGGTCTTGCGGCAGAGAAGGGTGACATGTTGAGAGGGACTCCTTCGTCTCCTTTTCGTGATTTGGGCGCTCCCTTGCCGCCCTCTCATGTGGGTGGTGGTGGTGCTGCTGCTGTTGATTTCAGTGCTGTGGCAGACATAAAAGGTTCCTCAAAGAGTTTTCCGAAGCACGAGACACGACACCTTTCAGAGCACAAGAATATTGCCAGATGTGCAAGGTTTAGTCCTGATGGAAGGTTTGTTGCCACCGGTAGTGCAGATACATCTATTAAGCTATTTGAGGTTTCAAAGATCAAGCAAACGCTACTTCCAGATACAAAAGATGGCCCTGTCCGGCCTGTCATTCGAACATTTTACGACCACATACAGCCAATAAATGATCTGGATTTTCATCCACAAGGTACCATCCTGATTTCGGGAGCCAAAGATCAAACAATAAAATTTTTTGATATTTCTAAAACCAATGCTAAGAGAGCATACAGGGTTATCCAGGACACACACAATGTTCGCTCTGTATCTTTTCATCCATCTGGAGACTTTGTGCTTGCAGGAACTGATCATGCAATTCCACATTTGTATGATGTAAATACTTTTCAGTGTTATCTATCAGCAAACATCCCAGAGATTGGCCCAAATGGAGCCATAAATCAGGTCAGATATTCTTGTACAGGCTCCATGTACGTTACAGCATCCAAAGATGGTGCTATTCGGTTGTGGGATGGCATCAGTTCGGATTGTGTGCGCTCAATAACTGGAGCACATGGGACAGCTGAGGCTACCAGTGCAATTTTTACAAAGGATCAAAGGTTTGTGCTCTCCTGCGGGAAGGATTCGACTATAAAGCTTTGGGAAGTCGGCTCTGGAAGATTATTCAAACAATATCTTGGAGCCATGCATACACAACTAAGAAGCCAGGCAATTTTTAATGAGACAGAGGAATTTATTCTATCCATAGATGAACTCAGCAATGAGATTGTTATCTGGGATGTCATGACAACAGAAAAAGTAGCAAAGTGGCCTTCTAATCATGTTGGTGCACCTCGTTGGCTTGAACACTCACCAATAGAGTCTGCTTTTATTTCATGTGGAACTGATAGATCAGTTAGGTTCTGGAAGGAAACTCCATAG 1311 0.4394 MDNSNWDHTLQDGKLYRHLNSLIVAHLRDNNLTQAASAVASATMTPLNVEAPPNKLLELVAKGLAAEKGDMLRGTPSSPFRDLGAPLPPSHVGGGGAAAVDFSAVADIKGSSKSFPKHETRHLSEHKNIARCARFSPDGRFVATGSADTSIKLFEVSKIKQTLLPDTKDGPVRPVIRTFYDHIQPINDLDFHPQGTILISGAKDQTIKFFDISKTNAKRAYRVIQDTHNVRSVSFHPSGDFVLAGTDHAIPHLYDVNTFQCYLSANIPEIGPNGAINQVRYSCTGSMYVTASKDGAIRLWDGISSDCVRSITGAHGTAEATSAIFTKDQRFVLSCGKDSTIKLWEVGSGRLFKQYLGAMHTQLRSQAIFNETEEFILSIDELSNEIVIWDVMTTEKVAKWPSNHVGAPRWLEHSPIESAFISCGTDRSVRFWKETP* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1690 436 ProSiteProfiles Trp-Asp (WD) repeats profile. 123 164 IPR001680 GO:0005515
Aev08g1690 436 ProSiteProfiles Trp-Asp (WD) repeats profile. 179 220 IPR001680 GO:0005515
Aev08g1690 436 PANTHER CLEAVAGE STIMULATION FACTOR SUBUNIT 1 7 435 IPR044633 GO:0005848|GO:0031124
Aev08g1690 436 CDD WD40 119 433 - -
Aev08g1690 436 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 179 213 - -
Aev08g1690 436 ProSitePatterns Trp-Asp (WD) repeats signature. 332 346 IPR019775 -
Aev08g1690 436 ProSiteProfiles Trp-Asp (WD) repeats profile. 325 354 IPR001680 GO:0005515
Aev08g1690 436 Pfam WD domain, G-beta repeat 306 344 IPR001680 GO:0005515
Aev08g1690 436 Pfam WD domain, G-beta repeat 227 250 IPR001680 GO:0005515
Aev08g1690 436 Pfam WD domain, G-beta repeat 120 154 IPR001680 GO:0005515
Aev08g1690 436 Pfam WD domain, G-beta repeat 176 211 IPR001680 GO:0005515
Aev08g1690 436 Pfam WD domain, G-beta repeat 275 301 IPR001680 GO:0005515
Aev08g1690 436 SUPERFAMILY WD40 repeat-like 115 433 IPR036322 GO:0005515
Aev08g1690 436 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 269 301 - -
Aev08g1690 436 SMART WD40_4 172 211 IPR001680 GO:0005515
Aev08g1690 436 SMART WD40_4 393 433 IPR001680 GO:0005515
Aev08g1690 436 SMART WD40_4 304 345 IPR001680 GO:0005515
Aev08g1690 436 SMART WD40_4 217 255 IPR001680 GO:0005515
Aev08g1690 436 SMART WD40_4 258 301 IPR001680 GO:0005515
Aev08g1690 436 SMART WD40_4 116 155 IPR001680 GO:0005515
Aev08g1690 436 ProSiteProfiles Trp-Asp (WD) repeats profile. 269 310 IPR001680 GO:0005515
Aev08g1690 436 Gene3D - 107 435 IPR015943 GO:0005515
Aev08g1690 436 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 123 157 - -
Aev08g1690 436 PRINTS G protein beta WD-40 repeat signature 332 346 IPR020472 -
Aev08g1690 436 PRINTS G protein beta WD-40 repeat signature 198 212 IPR020472 -
Aev08g1690 436 PRINTS G protein beta WD-40 repeat signature 288 302 IPR020472 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1690 176 436 Miscellaneous Gene Families AT5G08390 22.642 4.54e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1690 K14406 - gmx:100809908 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1690 08 13408270 13417881 Aev08g1690 08 13408270 13417881 ECH