Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1342 ATGACTAATCCCCCGCCGGAGAGGCTGCGTGAGGTTGACGCAGAAAGATGTTTGTACAAAACTCAAATTGAAAACTCCCATTCCCATCGCATTCCTTCTAAACCCTCGCACACAAATCCACCATCACCATATATAAAGCGTCCTTCACTCCTTCGCACCTCTCTTCTCTTCATCCATCGTAAACGCAACGCAACCGCATCACTCTTCTCTACTCTCACTACCTTACCAATGGCTCTGCCGAATCAGCAAACCGTTGATTACCCGAGCTTCAAGCTCGTCATTGTCGGCGATGGTGGAACAGGAAAGACAACCTTCGTGAAGAGGCATCTTACTGGGGAATTTGAGAAGAAATATGAACCGACGATTGGTGTGGAGGTTCACCCGTTGGATTTCTTCACCAACTGCGGCAAGATTCGGTTCTACTGCTGGGACACTGCTGGCCAAGAGAAGTTTGGTGGTCTTAGAGATGGATATTATATTCATGGGCAATGTGCAATTATAATGTTTGACGTTACTGCTCGATTGACATACAAAAACGTCCCTACATGGCACCGTGATCTTTGCAGGGTCTGTGAAAACATCCCAATTGTTCTTTGCGGTAACAAGGTTGATGTGAAGAACAGACAAGTGAAGGCAAAGCAGGTTACCTTCCACAGGAAGAAGAATTTGCAGTACTATGAGATATCAGCTAAAAGCAACTACAACTTTGAGAAGCCTTTCTTGTACCTTGCCAGGAAACTTGCAGGCGATCCCAACCTACATTTTGTAGAATCTCCTGCATTGGCTCCACCAGAAGTTCAAATTGATATAGCTGCTCAGCAACAGCACGAGGCTGAGCTTGCTGCAGCTGCTAGTCAGCCCCTTCCTGACGATGATGATGACACATTTGAGTAA 894 0.462 MTNPPPERLREVDAERCLYKTQIENSHSHRIPSKPSHTNPPSPYIKRPSLLRTSLLFIHRKRNATASLFSTLTTLPMALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIAAQQQHEAELAAAASQPLPDDDDDTFE* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1342 297 SMART ras_sub_4 87 250 - -
Aev08g1342 297 CDD Ran 90 255 - -
Aev08g1342 297 SMART ran_sub_2 95 296 - -
Aev08g1342 297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 270 IPR027417 -
Aev08g1342 297 PANTHER GTP-BINDING NUCLEAR PROTEIN 52 297 - -
Aev08g1342 297 Gene3D - 79 295 IPR027417 -
Aev08g1342 297 SMART rho_sub_3 92 246 IPR001806 GO:0003924|GO:0005525
Aev08g1342 297 ProSiteProfiles small GTPase Ran family profile. 83 247 IPR002041 GO:0003924|GO:0005525|GO:0006913
Aev08g1342 297 TIGRFAM small_GTP: small GTP-binding protein domain 90 240 IPR005225 GO:0005525
Aev08g1342 297 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 206 224 IPR002041 GO:0003924|GO:0005525|GO:0006913
Aev08g1342 297 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 103 117 IPR002041 GO:0003924|GO:0005525|GO:0006913
Aev08g1342 297 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 170 191 IPR002041 GO:0003924|GO:0005525|GO:0006913
Aev08g1342 297 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 150 168 IPR002041 GO:0003924|GO:0005525|GO:0006913
Aev08g1342 297 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 244 266 IPR002041 GO:0003924|GO:0005525|GO:0006913
Aev08g1342 297 SMART rab_sub_5 90 250 - -
Aev08g1342 297 ProSiteProfiles small GTPase Rab1 family profile. 84 297 - -
Aev08g1342 297 MobiDBLite consensus disorder prediction 23 45 - -
Aev08g1342 297 ProSiteProfiles small GTPase Ras family profile. 81 281 IPR001806 GO:0003924|GO:0005525
Aev08g1342 297 MobiDBLite consensus disorder prediction 276 297 - -
Aev08g1342 297 Pfam Ras family 91 247 IPR001806 GO:0003924|GO:0005525
Aev08g1342 297 PANTHER RAN GTPASE 52 297 IPR002041 GO:0003924|GO:0005525|GO:0006913
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1342 Aev-Chr8 8723988 8726692 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1342 K07936 - han:110891518 452.981